DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and PSMB5

DIOPT Version :10

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_002788.1 Gene:PSMB5 / 5693 HGNCID:9542 Length:263 Species:Homo sapiens


Alignment Length:186 Identity:57/186 - (30%)
Similarity:97/186 - (52%) Gaps:4/186 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIADIVAYSLN 79
            |||.:|.:|..||::.||||.::|||:|::...|:..|...:....:|.|||......::|....
Human    59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCR 123

  Fly    80 YHENQTNKDALVFEAASE-FRNYCYSYR-ESLLAGIIVAGWDEQRGGQVYSIPLGGMLTRESCTI 142
            .:|.: ||:.:...|||: ..|..|.|: ..|..|.::.|||::..|..|....|..::..:.::
Human   124 IYELR-NKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGNRISGATFSV 187

  Fly   143 GGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGIITKDG 198
             ||||.:.||.:...|..::.:|......::|:..|.|.|..|||.|.:..:.:||
Human   188 -GSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHVREDG 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 56/185 (30%)
PSMB5NP_002788.1 proteasome_beta_type_5 60..247 CDD:239730 56/185 (30%)

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