DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and Prosbeta4R2

DIOPT Version :10

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_722823.2 Gene:Prosbeta4R2 / 33451 FlyBaseID:FBgn0031443 Length:210 Species:Drosophila melanogaster


Alignment Length:197 Identity:35/197 - (17%)
Similarity:74/197 - (37%) Gaps:32/197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 TIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIADIVAYSLN-- 79
            ||:.::....|::.:|:..:...........|:.|::|.......|...||....|.::.:|:  
  Fly     5 TILGIKGPDFVMLASDTMQAKSLVFMKDDQSKIHRLSDFNMMATVGDGGDTIQFTDFISKNLHLY 69

  Fly    80 -----YHENQTNKDALVFEAASEFRNYCYSYRESLLAGIIVAGWDEQRGGQVYSIPLGGMLTRES 139
                 ||.:..:......:..:::......|:.::|    :||:|...|..::.|...|.....:
  Fly    70 KISHGYHLSAKSAAHFTRKTLADYIRTNTRYQVAML----LAGYDAVEGPDLHYIDSYGAAQSIN 130

  Fly   140 CTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGIITKDGIERRIF 204
            ....|.||.|....::.::...::.||..:.:||.|..                     |:||:.
  Fly   131 HAGHGWGSMFCGSILQRYWNSKLSQEDAYSLMKKCVLE---------------------IQRRLI 174

  Fly   205 YN 206
            .|
  Fly   175 IN 176

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 33/192 (17%)
Prosbeta4R2NP_722823.2 proteasome_beta_type_2 3..194 CDD:239727 35/197 (18%)

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