DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and Psma7

DIOPT Version :10

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_036099.1 Gene:Psma7 / 26444 MGIID:1347070 Length:248 Species:Mus musculus


Alignment Length:199 Identity:41/199 - (20%)
Similarity:75/199 - (37%) Gaps:11/199 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DFTDTPVSTGTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAI 70
            ::....|..|:|.:.|.....||:|.:.: |.......|...|:..:.|.|....:|..||.:.:
Mouse    20 EYAQEAVKKGSTAVGVRGKDIVVLGVEKK-SVAKLQDERTVRKICALDDNVCMAFAGLTADARIV 83

  Fly    71 ADIVAYSLNYHENQTNKDALVFE-----AASEFRNYCYSY-RESLLAGIIVAGWDEQRGGQVYSI 129
            .:........| ..|.:|.:..|     .||..:.|..|. |.......::.|:|.....::|..
Mouse    84 INRARVECQSH-RLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQT 147

  Fly   130 PLGGMLTRESCTIGGSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGV-VRIGI 193
            ...|..........|.|:..:..|:.::|..:....|.:|.  |.|..|:.....|||. :.:.:
Mouse   148 DPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTI--KLVIKALLEVVQSGGKNIELAV 210

  Fly   194 ITKD 197
            :.:|
Mouse   211 MRRD 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 39/189 (21%)
Psma7NP_036099.1 proteasome_alpha_type_7 3..211 CDD:239724 40/194 (21%)

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