DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta1 and Psmb8

DIOPT Version :10

Sequence 1:NP_652031.2 Gene:Prosbeta1 / 46058 FlyBaseID:FBgn0010590 Length:224 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:185 Identity:53/185 - (28%)
Similarity:95/185 - (51%) Gaps:2/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKVYCCRSGSAADTQAIADIVAYSLN 79
            |||.:|.:|..||::..|||.::|:|:::...:|:..|...:....||.|||.|....::|....
Mouse    72 GTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECR 136

  Fly    80 YHENQTNKDALVFEAASEFRNYCYSYR-ESLLAGIIVAGWDEQRGGQVYSIPLGGMLTRESCTIG 143
            .:..:..:...|..|:....|....|| ..|..|.::.|||::..|..|....|..|:.:..:. 
Mouse   137 LYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFST- 200

  Fly   144 GSGSSFIYGFVREHYRPNMALEDCVTFVKKAVQHAIYHDGSSGGVVRIGIITKDG 198
            |||:::.||.:...||.:::.|:.....::|:.:|.:.|..|||||.:..:.:||
Mouse   201 GSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDG 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta1NP_652031.2 proteasome_beta_type_6 16..203 CDD:239731 52/184 (28%)
Psmb8NP_034854.2 proteasome_beta_type_5 73..260 CDD:239730 52/184 (28%)

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