DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and stom

DIOPT Version :10

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:XP_017208322.1 Gene:stom / 81534 ZFINID:ZDB-GENE-980526-486 Length:305 Species:Danio rerio


Alignment Length:234 Identity:51/234 - (21%)
Similarity:105/234 - (44%) Gaps:36/234 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RAIIFSRLGGI-QSDIYSEGLHVRIPWFQYPIIYDIRS-----RPRKISSPTGSKDLQMINISLR 108
            ||||| |||.| :......||...:|.....|..|:|:     .|:::.    :||...:::...
Zfish    85 RAIIF-RLGRILRGGAKGPGLFFILPCTDSFINVDMRTITFDIPPQEVL----TKDSVTVSVDGV 144

  Fly   109 VLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERA 173
            |..|..:..|...:    :...:.....:....|::|:...|.:::::.|::::..::..|.:..
Zfish   145 VYYRVQNATLAVAN----ITNADAATRLLAQTTLRNVLGTKNLAEILSDREEIAHSMQSTLDDAT 205

  Fly   174 RDFNIILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKM 238
            .|:.|.::.|.:.::..              ..:.|||:.....|.:|.:.|::.||||..|::.
Zfish   206 DDWGIKVERVEIKDVKL--------------PLQLQRAMAAEAEASREARAKVIAAEGEMNASRA 256

  Fly   239 L---GLAVKQNPAYLKLRKLRAAQSIARTIASSQNKVYL 274
            |   .|.:.::|:.|:||.|:.    ..|||:.:|...:
Zfish   257 LKEASLVIAESPSALQLRYLQT----LNTIAAEKNSTII 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 39/191 (20%)
stomXP_017208322.1 SPFH_stomatin 96..297 CDD:259801 42/222 (19%)

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