DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and stoml3a

DIOPT Version :9

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001092220.1 Gene:stoml3a / 571219 ZFINID:ZDB-GENE-070620-18 Length:284 Species:Danio rerio


Alignment Length:284 Identity:62/284 - (21%)
Similarity:116/284 - (40%) Gaps:66/284 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 PPGLG------IGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI-QSDIYSEGLHVRIPW 75
            ||.:|      |.:.::..:|.....:...:..|:...||:|| |||.| .......|:...:|.
Zfish    24 PPSMGCFGWLIIIIAIIITIGLLPITIFMCIKIVQEYERAVIF-RLGRILDKKPKGPGIFFVLPC 87

  Fly    76 FQYPIIYDIRSRPRKISSPTG-SKDLQMINISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICN 139
            ....:..|:|:....|.:... :||...:|:.                   ||.| .:|...||:
Zfish    88 TDSFMKVDLRTVTFNIPAQEFLTKDSVTVNVD-------------------GVVY-FRVFDPICS 132

  Fly   140 ----------------EVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNIILDDVSLTEL 188
                            ..|::|:...|.|:|::.|:.:|..::..|.|....:.|.::.|.:   
Zfish   133 VANVSNANQATQLLAQTTLRNVLGTKNLSELLSDREGISNSMQIALDEATGVWGIKVERVEI--- 194

  Fly   189 SFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKML---GLAVKQNPAYL 250
               |:....|:.::....||:        |.:|.:.|::.||||..|::.|   .|.:.::|:.|
Zfish   195 ---KDVKLPIQLQRAMAAEAE--------ASREARAKVIAAEGEMNASRALKEASLVIAESPSAL 248

  Fly   251 KLRKLRAAQSIARTIASSQNKVYL 274
            :||.|:...    |||:.:|...:
Zfish   249 QLRYLQTLS----TIAAERNSTII 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 45/211 (21%)
stoml3aNP_001092220.1 PHB 52..204 CDD:214581 36/178 (20%)
SPFH_like 77..274 CDD:302763 48/230 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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