DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and stoml1

DIOPT Version :9

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001103502.1 Gene:stoml1 / 563294 ZFINID:ZDB-GENE-070209-241 Length:410 Species:Danio rerio


Alignment Length:192 Identity:39/192 - (20%)
Similarity:64/192 - (33%) Gaps:53/192 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GAAAYGVSQSLYTVEG-------GHRAIIFSRLGGIQSDIY---SEGL----------------- 69
            |.:.||.:..|::...       .||...|..:..:..:.|   |:||                 
Zfish    18 GESGYGETPGLFSSHSPFNNSHHDHRGHSFDYVPKVHQNDYTDKSQGLLSWLCNLIVTFLVFLFT 82

  Fly    70 HVRIP---WFQYPIIYDI---------RSRPRKISSPTGSKDLQMINISLRVLSRPDSLNLPYLH 122
            .|..|   ||...::.:.         |.||.|  .|.....|..|:...||..|..:.|:|...
Zfish    83 FVTFPISGWFVLKVVPNYERVVVFRLGRIRPPK--GPGVVLILPFIDQWQRVDLRTRAFNIPPCK 145

  Fly   123 --------KQLGVDYDEKVLPSICNEVLKSVIAKFNAS-QLITQRQQVSLLIRKELVERARD 175
                    ..:|.|...::...:.:.|   .:...|:| :|..|...::.|.:|.|.|...|
Zfish   146 VCTKDSGLVSVGADIQFRIWSPVMSVV---AVQDLNSSTRLTAQNAMMTSLSKKSLREIQTD 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 36/182 (20%)
stoml1NP_001103502.1 PHB 94..232 CDD:214581 24/116 (21%)
SPFH_SLP-1 109..239 CDD:259814 24/101 (24%)
SCP2 301..405 CDD:280250
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0330
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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