DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and sto-3

DIOPT Version :10

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_509941.1 Gene:sto-3 / 191966 WormBaseID:WBGene00006065 Length:267 Species:Caenorhabditis elegans


Alignment Length:227 Identity:47/227 - (20%)
Similarity:94/227 - (41%) Gaps:42/227 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 RAIIFSRLGGI-QSDIYSEGLHVRIPWFQYPIIYDIRSRPRKISSPTG---SKDLQMINISLRVL 110
            |.:|| |||.: |.:....|:.:.:|:.......|:|.....:  ||.   ::|...|.:...|.
 Worm    47 RMVIF-RLGRLWQDNPRGPGIVLVLPFIDSHKTVDLRVMSYDV--PTQEMLTRDSVTIGVDAAVY 108

  Fly   111 SRPDS-------LNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKE 168
            .|...       :|..::..:           .:....|::|:...:.::|:|.|..:::.::..
 Worm   109 YRTSDPIASLARVNDAHMSTR-----------QLAQSSLRNVLGTRSLAELMTDRHGIAVQVKYI 162

  Fly   169 LVERARDFNIILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEA 233
            |......:.|.::.|.:.::...:|...|:    .|:.||||          |...|:|.|:||.
 Worm   163 LDSATLFWGIHVERVEIKDIRLPREMCRAM----AAEAEAQR----------ESDAKVVTAQGEL 213

  Fly   234 EAAKMLGLAVKQ---NPAYLKLRKLRAAQSIA 262
            :|:.....|..:   :|..|:||.|:....|:
 Worm   214 DASMAFQKAADELAGSPTALQLRYLQTLVKIS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 39/196 (20%)
sto-3NP_509941.1 SPFH_like 62..261 CDD:473137 40/211 (19%)

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