DRSC/TRiP Functional Genomics Resources

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Protein Alignment Phb2 and mec-2

DIOPT Version :9

Sequence 1:NP_001097372.1 Gene:Phb2 / 46038 FlyBaseID:FBgn0010551 Length:338 Species:Drosophila melanogaster
Sequence 2:NP_001368712.1 Gene:mec-2 / 180826 WormBaseID:WBGene00003166 Length:1239 Species:Caenorhabditis elegans


Alignment Length:303 Identity:60/303 - (19%)
Similarity:116/303 - (38%) Gaps:83/303 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 VEGGHRAIIFSRLGGIQS---------------DIYSEGLHVRIPWFQYPIIYDIRSRPRKISSP 94
            |:...||:|| |||.:..               |.|.: :.:|:..|:.|        |::|.  
 Worm   144 VQEYERAVIF-RLGRLMPGGAKGPGIFFIVPCIDTYRK-VDLRVLSFEVP--------PQEIL-- 196

  Fly    95 TGSKDLQMINISLRVLSRPDSLNLPYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQ 159
              |||...:.:...|..|..:..:...:    |:...:....:....|::::.....:::::.|:
 Worm   197 --SKDSVTVAVDAVVYFRISNATISVTN----VEDAARSTKLLAQTTLRNILGTKTLAEMLSDRE 255

  Fly   160 QVSLLIRKELVERARDFNIILDDVSLTELSFGKEYTAAIEAKQV-AQQEAQRAVFFVERAKQEKQ 223
            .:|..::..|.|....:.:.::               .:|.|.| ...:.|||:.....|.:|.:
 Worm   256 AISHQMQTTLDEATEPWGVKVE---------------RVEVKDVRLPVQLQRAMAAEAEAAREAR 305

  Fly   224 QKIVQAEGEAEAAKMLGLA---VKQNPAYLKLRKLRAAQSIARTIASSQNKVYLSADSLMLNIQD 285
            .|::.||||.:|::.|..|   :.::|:.|:||.|:...||:                       
 Worm   306 AKVIVAEGEQKASRALKEAAEVIAESPSALQLRYLQTLNSIS----------------------- 347

  Fly   286 SGFDDMTEKVYKIGTGLPKDWLDA--RKMASKVAQPAEKEKNV 326
                  .||...|....|.|.|.|  ::...||.:|....|.:
 Worm   348 ------AEKNSTIIFPFPIDLLSAFLQRTPPKVEEPPSLPKKI 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Phb2NP_001097372.1 SPFH_prohibitin 42..236 CDD:259799 39/206 (19%)
mec-2NP_001368712.1 SPFH_stomatin 160..361 CDD:259801 45/261 (17%)
PTZ00121 <571..>913 CDD:173412
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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