Protein Alignment Ccs and SOD1

DIOPT Version :10

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_012638.1
• Gene: SOD1 / 853568
• SGDID: S000003865
• Length: 154
• Species: Saccharomyces cerevisiae
• Alignment Length: 167
• Identity: 65/167 - (38%)
• Similarity: 89/167 - (53%)
• Gaps: 26/167 - (15%)

  Fly    64 AVLSGFGGQSAVALINTTGSVVDKTPIQGVVRFTTITADKKPGVVVDGVVDGLSPGL-HGLHIHE 127
            |||.|..|                  :.|||:|.  .|.:.....|...:.|.||.. .|.||||
Yeast     6 AVLKGDAG------------------VSGVVKFE--QASESEPTTVSYEIAGNSPNAERGFHIHE 50

  Fly   128 SGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEV---WDI 189
            .||.:.||.|.|.|:||.:..||:|.  .|.||.||:||::.||||.|...|.|.::::   ..:
Yeast    51 FGDATNGCVSAGPHFNPFKKTHGAPT--DEVRHVGDMGNVKTDENGVAKGSFKDSLIKLIGPTSV 113

  Fly   190 IGRAVVLTANADDLGRGGNDQSLIDGNSGERIACGII 226
            :||:||:.|..||||:|..::||..||:|.|.|||:|
Yeast   114 VGRSVVIHAGQDDLGKGDTEESLKTGNAGPRPACGVI 150

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	Sod_Cu	90..226	CDD:459663	59/139 (42%)
SOD1	NP_012638.1	Sod_Cu	14..150	CDD:459663	59/139 (42%)