Protein Alignment Ccs and CSD1

DIOPT Version :10

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_172360.1
• Gene: CSD1 / 837405
• AraportID: AT1G08830
• Length: 152
• Species: Arabidopsis thaliana
• Alignment Length: 156
• Identity: 73/156 - (46%)
• Similarity: 94/156 - (60%)
• Gaps: 16/156 - (10%)

  Fly    75 VALINTTGSVVDKTPIQGVVRFTTITADKKPGV-VVDGVVDGLSPGLHGLHIHESGDTSAGCSSV 138
            ||::|::..|.      |.:.||    .:..|| .|.|.|.||.|||||.|:|..|||:.||.|.
plant     5 VAVLNSSEGVT------GTIFFT----QEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMST 59

  Fly   139 GEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVD---PVLEVWDIIGRAVVLTANA 200
            |.|:||....||:|...  .|||||||||...::|.|||...|   |:.....|:|||||:.|:.
plant    60 GPHFNPDGKTHGAPEDA--NRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADP 122

  Fly   201 DDLGRGGNDQSLIDGNSGERIACGII 226
            ||||:||::.||..||:|.|:|||||
plant   123 DDLGKGGHELSLATGNAGGRVACGII 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	Sod_Cu	90..226	CDD:459663	67/139 (48%)
CSD1	NP_172360.1	PLN02386	1..152	CDD:166027	73/156 (47%)