Protein Alignment Ccs and Sod1

DIOPT Version :9

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_476735.1
• Gene: Sod1 / 39251
• FlyBaseID: FBgn0003462
• Length: 153
• Species: Drosophila melanogaster
• Alignment Length: 142
• Identity: 63/142 - (44%)
• Similarity: 81/142 - (57%)
• Gaps: 7/142 - (4%)

  Fly    90 IQGVVRFTTITADKKPG--VVVDGVVDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSP 152
            |.|..:.|.....:..|  |.|.|.|.||:.||||.|:||.||.:.||.|.|.|:||....||:|
  Fly     9 INGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYGKEHGAP 73

  Fly   153 AAGAEERHAGDLGNIRADENGRATFRFVDPVLEVW---DIIGRAVVLTANADDLGRGGNDQSLID 214
            .  .|.||.||||||.|..:........|..:.::   .||||.||:.|:|||||:||::.|...
  Fly    74 V--DENRHLGDLGNIEATGDCPTKVNITDSKITLFGADSIIGRTVVVHADADDLGQGGHELSKST 136

  Fly   215 GNSGERIACGII 226
            ||:|.||.||:|
  Fly   137 GNAGARIGCGVI 148

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	PLN02957	1..253	CDD:215516	63/142 (44%)
		HMA	5..64	CDD:238219
		Cu-Zn_Superoxide_Dismutase	72..223	CDD:238186	60/137 (44%)
Sod1	NP_476735.1	Cu-Zn_Superoxide_Dismutase	2..150	CDD:412632	63/142 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466841
Domainoid	1	1.000	57	1.000	Domainoid score	I612
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	57	1.000	Inparanoid score	I436
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D608177at33208
OrthoFinder	1	1.000	-	-		FOG0000641
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR10003
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	7	7.000