Protein Alignment Ccs and ccs1

DIOPT Version :10

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_001342818.1
• Gene: ccs1 / 2541803
• PomBaseID: SPAC22E12.04
• Length: 297
• Species: Schizosaccharomyces pombe
• Alignment Length: 225
• Identity: 60/225 - (26%)
• Similarity: 94/225 - (41%)
• Gaps: 56/225 - (24%)

  Fly    36 DTQEGRVIIQTQRPWSEIQDKIE-ATGVRAVLSGFGG-QSAVALINTTGSVVDKTP-IQGVVRFT 97
            |...|::|::.....|::..::| ||....::.|... :|.|:::......:.:.| :.|:.||
pombe    34 DAATGQLIVKGSVSPSKVLRRLENATSKPILIRGASNKESGVSILYEANEDITQIPKVYGLCRF- 97

  Fly    98 TITADKKPGVVVDGVVDGLSPGLH--GLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERH 160
             |..::|  :.:|.:...|.|...  || :..|||.|.|..|
pombe    98 -IPTEEK--IFLDLIATQLLPNREYTGL-VTISGDISRGLKS----------------------- 135

  Fly   161 AGD----LGNIRADENGRATF-RFVDPVLEVWDIIGRAVVLTANADDLGRGGNDQSLIDGNSGER 220
            |||    |.|..::|.|:... :.|...|..|  ||...||.. .||               .:.
pombe   136 AGDSLVTLFNANSNEQGKIVLDKEVSGSLPNW--IGHCFVLKC-VDD---------------SDS 182

  Fly   221 IACGIIARSAGILENFKRICACDGVTLWDE 250
            ...|||:||||:.:|.|:||||.|.:||.|
pombe   183 ATMGIISRSAGLGQNTKQICACTGKSLWTE 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	Sod_Cu	90..226	CDD:459663	33/142 (23%)
ccs1	NP_001342818.1	PLN02957	<89..210	CDD:215516	47/166 (28%)