Protein Alignment Ccs and sod-5

DIOPT Version :10

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: NP_494779.1
• Gene: sod-5 / 173776
• WormBaseID: WBGene00007036
• Length: 178
• Species: Caenorhabditis elegans
• Alignment Length: 189
• Identity: 71/189 - (37%)
• Similarity: 102/189 - (53%)
• Gaps: 37/189 - (19%)

  Fly    52 EIQDKIEATGVRAVLSGFGGQSAVALINTTGSVVDKTPIQGVVRFTTITADKKPG--VVVDGVVD 114
            ::..|:|:....|||.|                   |.:.|.|..|    .|..|  ...:|.:.
 Worm    15 DVVSKVESKRAVAVLRG-------------------TAVFGTVWLT----QKAEGEETEFEGEIK 56

  Fly   115 GLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEE--RHAGDLGNIRADENGRATF 177
            ||||||||.|||:.||::.||:|.|.|:||.:..||    |.:.  ||.|||||:.|..:|.|..
 Worm    57 GLSPGLHGFHIHQYGDSTDGCTSAGPHFNPCKMNHG----GRDSVVRHVGDLGNVEAGADGVAKI 117

  Fly   178 RFVDPVLEVW---DIIGRAVVLTANADDLGRGGND---QSLIDGNSGERIACGIIARSA 230
            :|.|.|:.::   .:|||::|:..:.||||:|.:|   :||..||:|.|.|||:||.:|
 Worm   118 KFSDKVVSLFGANTVIGRSMVVHVDRDDLGQGIDDKAEESLKTGNAGARAACGVIALAA 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	Sod_Cu	90..226	CDD:459663	61/145 (42%)
sod-5	NP_494779.1	Sod_Cu	34..172	CDD:459663	61/145 (42%)