Protein Alignment Ccs and Ccs

DIOPT Version :10

• Sequence 1: NP_001163108.1
• Gene: Ccs / 46035
• FlyBaseID: FBgn0010531
• Length: 264
• Species: Drosophila melanogaster
• Sequence 2: XP_308747.5
• Gene: Ccs / 1270080
• VectorBaseID: AGAMI1_012400
• Length: 253
• Species: Anopheles gambiae
• Alignment Length: 259
• Identity: 123/259 - (47%)
• Similarity: 165/259 - (63%)
• Gaps: 44/259 - (16%)

  Fly     3 SIKIEFAVQMRRGDESYAGA---LRSALDGVGQVEIDTQEGRVIIQTQRPWSEIQDKIEATGVRA 64
            ||::|||||:|.     ||.   :...|...|.|.||..:|.|:|:|..||.:|..:|||||.||
Mosquito    21 SIQMEFAVQIRG-----AGCVADINKTLSDAGTVTIDADKGSVLIETSLPWLDIHKRIEATGRRA 80

  Fly    65 VLSGFGGQSAVALINTTGSVVDKTPIQGVVRFTTITADK-KPGVVVDGVVDGLS-PGLHGLHIHE 127
            ||:|||||||||:::...   :.|.::||:||.|:::.. :.|.||||.:|||| .|...|::||
Mosquito    81 VLTGFGGQSAVAMVDHGN---ESTNVRGVIRFCTLSSTPGQKGAVVDGTIDGLSHSGTFQLNVHE 142

  Fly   128 SGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHAGDLGNIRADENGRATFRFVDPVLEVWDIIGR 192
            .||.||||||||:.|:      .||              ||:|||||||.|||:..|:|.|:|||
Mosquito   143 CGDISAGCSSVGDVYD------SSP--------------IRSDENGRATIRFVNDRLDVNDLIGR 187

  Fly   193 AVVLTANADDLGRGGNDQSLIDGNSGERIACGIIARSAGILENFKRICACDGVTLWDERNKPLA 256
            :||:|..|:   .|..::        .|::||||||||||.:|:|:||||||||:||||||.:|
Mosquito   188 SVVITQPAE---AGAQEE--------RRLSCGIIARSAGIFQNYKKICACDGVTIWDERNKSIA 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ccs	NP_001163108.1	Sod_Cu	90..226	CDD:459663	57/137 (42%)
Ccs	XP_308747.5	None