DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccs and LOC1269731

DIOPT Version :10

Sequence 1:NP_001163108.1 Gene:Ccs / 46035 FlyBaseID:FBgn0010531 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_061496827.1 Gene:LOC1269731 / 1269731 VectorBaseID:AGAMI1_007219 Length:268 Species:Anopheles gambiae


Alignment Length:182 Identity:47/182 - (25%)
Similarity:68/182 - (37%) Gaps:55/182 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IQGVVRFTTITADKKPGVVVDGV-VDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPA 153
            |.|.:.|    ....||.|...: |.||..|.|.:|:|..||...||.|.|.|:.          
Mosquito   103 IMGTISF----RQWAPGHVQTAINVTGLPVGKHAVHVHAFGDMREGCKSTGPHFR---------- 153

  Fly   154 AGAEERH-------------------------AGDLGNIRADENGRATFRFVDPVLEVW---DII 190
             .:..||                         :..:|||...|:|.|...|..|.:.::   .|:
Mosquito   154 -SSIVRHITVPFLKGMTVEVNYNVCVIELFCPSLQIGNIEVKEDGNAMIDFHSPYINLFGFAGIV 217

  Fly   191 GRAVVLTANADDLGR----GGNDQSLIDGNS---GERIACGIIARSAGILEN 235
            ||::|:.....::.|    ..|:.....|..   |.|||||:|.    ||:|
Mosquito   218 GRSIVIHEKPSEVYRFPDLSINNPISFQGEEDTVGARIACGLIT----ILDN 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CcsNP_001163108.1 Sod_Cu 90..226 CDD:459663 43/171 (25%)
LOC1269731XP_061496827.1 None

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