DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc3

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001038783.1 Gene:gipc3 / 724013 ZFINID:ZDB-GENE-060616-326 Length:333 Species:Danio rerio


Alignment Length:319 Identity:176/319 - (55%)
Similarity:218/319 - (68%) Gaps:15/319 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QFGSRSSMNSGSSQGSHISNNNNNSIPEK----------TKPPLVFHCQLAHGSPTGLIHDFSSV 74
            |.|...|.....|.|......:.:::|..          .:|.||||.|||||||||.||.|::|
Zfish    16 QNGEAMSPGPQDSTGPPGDEESQSTVPSAPPLPPDAAPCPRPKLVFHTQLAHGSPTGRIHGFTNV 80

  Fly    75 RELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGRPKEIEIVKSQDALG 139
            ||||.||||.|:||..:|||||||||||||.:||||||||:||||||.:|..||:|::|::||||
Zfish    81 RELYAKIAEVFNISPSEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVIKTEDALG 145

  Fly   140 LTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVARMLKDIATGETFTL 204
            ||||||||||||||||||.|.||||:.:.||||||.:|.|::||.||||||:|||:...|..|||
Zfish   146 LTITDNGAGYAFIKRIKEGSTIDRIKSVCVGDHIEAINDQSIVGCRHYEVAKMLKEQPRGTPFTL 210

  Fly   205 RLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQIEPQFDEATVAGIEAINNL 269
            ||||| :..|..||.|  :||..|:.|| ..|||||||.:..|:|.:|....|...|.|..:::|
Zfish   211 RLVEP-KKAFDMIGQR--TRAPKSSEGK-LSSGKETLRLRTRGSASLEEIPSELEDAAIRKVDDL 271

  Fly   270 LESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTDDFIIELWGAITDAR 328
            |||:|||.|.|||:.|.:.|..|.|..|||||:| |.|..|||.|.|:.::|||:.|.:
Zfish   272 LESYMGIRDLELATTIVEAGKNKKNPDDFAEALD-SVLGDFGFPDVFLFDVWGALGDVK 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 55/80 (69%)
gipc3NP_001038783.1 PDZ_signaling 132..204 CDD:238492 50/71 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595249
Domainoid 1 1.000 125 1.000 Domainoid score I5407
eggNOG 1 0.900 - - E1_KOG3938
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H77068
Inparanoid 1 1.050 321 1.000 Inparanoid score I2496
OMA 1 1.010 - - QHG52512
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm25159
orthoMCL 1 0.900 - - OOG6_105547
Panther 1 1.100 - - O PTHR12259
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5104
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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