DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc1

DIOPT Version :10

Sequence 1:NP_652028.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001004018.1 Gene:gipc1 / 445568 ZFINID:ZDB-GENE-060726-1 Length:335 Species:Danio rerio


Alignment Length:340 Identity:171/340 - (50%)
Similarity:228/340 - (67%) Gaps:21/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFTRKSPKQGPTSDGGSQFGSRSSMN-SG--------SSQGSHISNNNNNSIPEKTKPPLVFH 56
            |||...:..|..|..:.......|:.:| ||        ...|...::......|...:|.|:||
Zfish     1 MPLGLGRRKKASPLVENEEAEPIRAGLNVSGLDGLDGGRVGLGEGAAHEGLPPPPTSLRPRLIFH 65

  Fly    57 CQLAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAH 121
            .|||||||||.|..||:|||||.||.|.|.|...:::|||||:|||||.:||||||||:||||||
Zfish    66 TQLAHGSPTGRIEGFSNVRELYAKIGEAFGIPPTEVMFCTLNTHKVDMDKLLGGQIGLEDFIFAH 130

  Fly   122 RKGRPKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRH 186
            .||:.||:|:.|.:||||||||||||||||||||:|.|||.:|:.|:|||.||.:|||.::|.||
Zfish   131 VKGQRKEVEVFKGEDALGLTITDNGAGYAFIKRIREGSIIHQIQVINVGDMIESINGQILIGCRH 195

  Fly   187 YEVARMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQI 251
            ||||:|||::..|:||.|::|||::: |..|..||.|| ||||   ..|:|:.|||.::.|.|.:
Zfish   196 YEVAKMLKELPKGKTFFLKMVEPLKA-FDMISQRSGSR-SGSA---QLGTGRGTLRLRSKGPATV 255

  Fly   252 E---PQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFT 313
            |   ..|:|   ..||.:::||||:|||.|:|||:.:.:||..|.|..:||||:|.: |..|.|.
Zfish   256 EELPSAFEE---KAIEKVDDLLESYMGIRDSELAATMVELGKDKKNPDEFAEALDET-LGDFAFP 316

  Fly   314 DDFIIELWGAITDAR 328
            |:|:.::||||.||:
Zfish   317 DEFVFDVWGAIGDAK 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_652028.1 PDZ_GIPC 123..211 CDD:467191 57/87 (66%)
GH2_GIPC 263..324 CDD:409666 29/60 (48%)
gipc1NP_001004018.1 PDZ_GIPC1 130..223 CDD:467290 58/93 (62%)
GH2_GIPC 263..327 CDD:409666 30/67 (45%)

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