DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc2

DIOPT Version :10

Sequence 1:NP_652028.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_957224.1 Gene:gipc2 / 393904 ZFINID:ZDB-GENE-040426-921 Length:328 Species:Danio rerio


Alignment Length:337 Identity:167/337 - (49%)
Similarity:230/337 - (68%) Gaps:20/337 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFTRKSPKQGPTSD--------GGSQFGSRSSMNSGSSQGSHISNNNNNSIPEKTKPPLVFHC 57
            |||..||...:...|.        ||.....:|::|.|.....          |...:|.||||.
Zfish     1 MPLGLRKKKNKSRESSNLVENEEIGGHAVVGKSAVNGGGLPPP----------PASLRPKLVFHT 55

  Fly    58 QLAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHR 122
            |||||||||.|..|::|:|||.||||.|::|..:|||||||:||:||.:||||||||:||||||.
Zfish    56 QLAHGSPTGRIEGFTNVKELYNKIAEAFNLSPDEILFCTLNTHKIDMEKLLGGQIGLEDFIFAHI 120

  Fly   123 KGRPKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHY 187
            ||..||:::.||::|||||||||||||||||||||.|::|.::.|.||||||.:||:|:||.|||
Zfish   121 KGIKKEMDVYKSEEALGLTITDNGAGYAFIKRIKEGSVVDGVKVICVGDHIECINGKNIVGMRHY 185

  Fly   188 EVARMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQIE 252
            |||||||::...:||||:||||::: |:.:.|||:.....::|....|:|:||||.::.|.|.:|
Zfish   186 EVARMLKELPKDQTFTLKLVEPMKA-FEMLEPRSRGAGGKTSGEGKIGTGRETLRLRSKGPATVE 249

  Fly   253 PQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTDDFI 317
            ....|.....::.:::||||:|||.|||||:.:.::|..|.|..:||.|:|.: |..|.|.|:|:
Zfish   250 EMPTEFEEKAVKKVDDLLESYMGIRDTELAATMVEVGRDKKNPDEFAMALDQA-LGDFAFPDEFV 313

  Fly   318 IELWGAITDARR 329
            .::||||.||::
Zfish   314 FDVWGAIGDAKQ 325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_652028.1 PDZ_GIPC 123..211 CDD:467191 59/87 (68%)
GH2_GIPC 263..324 CDD:409666 26/60 (43%)
gipc2NP_957224.1 PDZ_GIPC2 119..211 CDD:467291 60/92 (65%)
GH2_GIPC 256..320 CDD:409666 26/64 (41%)

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