DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and Gipc2

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001032287.1 Gene:Gipc2 / 365960 RGDID:1560751 Length:314 Species:Rattus norvegicus


Alignment Length:332 Identity:160/332 - (48%)
Similarity:218/332 - (65%) Gaps:23/332 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFTRKSPKQGPTSDGGSQF-GSRSSMNSGSSQGSHISNNNNNSIPEKTKPP--LVFHCQLAHG 62
            |||..|...|...:.:..... |.|    ||.|||          :|....|.  ||||.|||||
  Rat     1 MPLGLRGKKKAAKSKETARLVEGER----SGGSQG----------VPGPPAPARRLVFHAQLAHG 51

  Fly    63 SPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGRPK 127
            |.||.:.||||:.|||.|||..|:|:..:|||||||:.|:||.:|||||:||:||||||.||..|
  Rat    52 SATGRVEDFSSISELYAKIAGVFEIAPSEILFCTLNTPKIDMGKLLGGQLGLEDFIFAHVKGIKK 116

  Fly   128 EIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVARM 192
            |:.:.||:|:|||||||||.|||||||||:.|.||.::.|.||||||.:||:|:||.||:|||:.
  Rat   117 EVNVYKSEDSLGLTITDNGVGYAFIKRIKDGSTIDSVKTICVGDHIECINGENIVGWRHFEVAKK 181

  Fly   193 LKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQIEPQFDE 257
            ||::...|.|||:|:|| :..|: |||||:   :|....:..|:.:.|||.::.|.|.:|....|
  Rat   182 LKELKKEELFTLQLIEP-KKAFE-IGPRSK---AGKTSTEKIGTSRGTLRLRSKGPATVEDLPSE 241

  Fly   258 ATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTDDFIIELWG 322
            |....||.:::|||.:|||.|.:||:.:::.|..|||..:||.|:|.: |..|.|.|:|:.::||
  Rat   242 AKAKAIEKVDDLLELYMGIRDIDLATTMFEAGKDKSNPDEFAVALDET-LGDFAFPDEFMFDVWG 305

  Fly   323 AITDARR 329
            ||:|.::
  Rat   306 AISDVKQ 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 49/80 (61%)
Gipc2NP_001032287.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 13/48 (27%)
PDZ_signaling 116..179 CDD:238492 41/62 (66%)
GH2_GIPC 243..307 CDD:409666 26/64 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353168
Domainoid 1 1.000 120 1.000 Domainoid score I5605
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 313 1.000 Inparanoid score I2497
OMA 1 1.010 - - QHG52512
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm46390
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12259
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.010

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