DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and Gipc3

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:XP_030100837.1 Gene:Gipc3 / 209047 MGIID:2387006 Length:1205 Species:Mus musculus


Alignment Length:282 Identity:146/282 - (51%)
Similarity:188/282 - (66%) Gaps:23/282 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSIPEKTKPPLVFHCQLAHGSPTGL 67
            |.||::|:   |.|      |.:....|:::.           |.:.:|.|||..|||||||||.
Mouse    79 LRTRRTPR---TMD------SAAPREPGATEP-----------PARARPRLVFRTQLAHGSPTGR 123

  Fly    68 IHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGRPKEIEIV 132
            |..|::|||||.||||.|.|:..:|||||||||||||.:||||||||:||||||.:|..||:|:.
Mouse   124 IEGFTNVRELYAKIAEAFGIAPTEILFCTLNSHKVDMQKLLGGQIGLEDFIFAHVRGETKEVEVT 188

  Fly   133 KSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVARMLKDIA 197
            |::||||||||||||||||||||||.|||:|||.:.|||.||.:|..::||.||||||:||:::.
Mouse   189 KTEDALGLTITDNGAGYAFIKRIKEGSIINRIEAVCVGDSIEAINDHSIVGCRHYEVAKMLRELP 253

  Fly   198 TGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQIEPQFDEATVAG 262
            ..:.||||||:| |..|..||.|  ||:|.........||:||||.::.|.|.:|....:...|.
Mouse   254 KSQPFTLRLVQP-RRAFDMIGQR--SRSSKCPVEAKVSSGRETLRLRSGGAATVEEAPSDVEAAA 315

  Fly   263 IEAINNLLESFMGINDTELASQ 284
            ...:::||||:|||.|.||..:
Mouse   316 ARRVDDLLESYMGIRDPELGKR 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 52/80 (65%)
Gipc3XP_030100837.1 PDZ_signaling 182..255 CDD:238492 48/72 (67%)
PHA03247 <353..757 CDD:223021
PHA03247 <821..1203 CDD:223021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849524
Domainoid 1 1.000 119 1.000 Domainoid score I5784
eggNOG 1 0.900 - - E1_KOG3938
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H77068
Inparanoid 1 1.050 310 1.000 Inparanoid score I2577
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52512
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm44290
orthoMCL 1 0.900 - - OOG6_105547
Panther 1 1.100 - - O PTHR12259
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5104
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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