DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc-2

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_501810.2 Gene:gipc-2 / 177865 WormBaseID:WBGene00009681 Length:357 Species:Caenorhabditis elegans


Alignment Length:341 Identity:122/341 - (35%)
Similarity:181/341 - (53%) Gaps:32/341 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QG-PTSDGGSQFGSRSSMNSGSSQG----------SHISNNNNNSIPEKTKPPLV------FHCQ 58
            || |.....|:..||.:.|..|:.|          :.|....::||.....|.:|      |.||
 Worm     4 QGAPCRRSRSRSRSRGAFNRRSNYGEAHPIQPAVLASIVEEPSSSIMPVVNPLMVAAKELKFPCQ 68

  Fly    59 LAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRK 123
            ||||||..:|..::.:.||||.||:.|.||:.||:|.|:|..|.||..:..|.:...|.:|||.:
 Worm    69 LAHGSPVAIIDKWNDMEELYQSIADFFAISKDDIIFLTVNDFKPDMKNMFSGTLNFKDMLFAHVR 133

  Fly   124 GRPKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHIS-VGDHIEKLNGQNMVGKRHY 187
            |:..|:.:||..:..|:|:||||.|.||||.|...|:.||:...: ||..||.:||::::|||||
 Worm   134 GQATELRMVKDANVFGVTVTDNGLGNAFIKVISPGSVFDRMRPATQVGQLIEAINGESVLGKRHY 198

  Fly   188 EVARMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGN---A 249
            :||||||.|..||...:||:.|..:   ..|....:|.:|.      ...|.|:|||:.|.   .
 Worm   199 QVARMLKSIRRGEECIIRLIAPKSA---DPGTMKMTRKTGG------DLAKGTIRFKSEGGFAVE 254

  Fly   250 QIEPQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTD 314
            .|:.|..:|.:.|  .:|.|.:.::|:.|.:||.:||:...........:|||..|:|..|.|.|
 Worm   255 DIQDQMIQAEMCG--KLNELFDQYLGVQDDQLAMRIWETASNCETLWQLSEAIKQSELSMFEFPD 317

  Fly   315 DFIIELWGAITDARRK 330
            ..:.::||.|.|.:|:
 Worm   318 GLVFDMWGIIGDLKRE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 39/81 (48%)
gipc-2NP_501810.2 PDZ_signaling 138..209 CDD:238492 36/70 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166734
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3938
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 214 1.000 Inparanoid score I2343
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52512
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm14544
orthoMCL 1 0.900 - - OOG6_105547
Panther 1 1.100 - - LDO PTHR12259
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5104
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.800

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