DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc-2

DIOPT Version :10

Sequence 1:NP_652028.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_501810.2 Gene:gipc-2 / 177865 WormBaseID:WBGene00009681 Length:357 Species:Caenorhabditis elegans


Alignment Length:341 Identity:122/341 - (35%)
Similarity:181/341 - (53%) Gaps:32/341 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QG-PTSDGGSQFGSRSSMNSGSSQG----------SHISNNNNNSIPEKTKPPLV------FHCQ 58
            || |.....|:..||.:.|..|:.|          :.|....::||.....|.:|      |.||
 Worm     4 QGAPCRRSRSRSRSRGAFNRRSNYGEAHPIQPAVLASIVEEPSSSIMPVVNPLMVAAKELKFPCQ 68

  Fly    59 LAHGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRK 123
            ||||||..:|..::.:.||||.||:.|.||:.||:|.|:|..|.||..:..|.:...|.:|||.:
 Worm    69 LAHGSPVAIIDKWNDMEELYQSIADFFAISKDDIIFLTVNDFKPDMKNMFSGTLNFKDMLFAHVR 133

  Fly   124 GRPKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHIS-VGDHIEKLNGQNMVGKRHY 187
            |:..|:.:||..:..|:|:||||.|.||||.|...|:.||:...: ||..||.:||::::|||||
 Worm   134 GQATELRMVKDANVFGVTVTDNGLGNAFIKVISPGSVFDRMRPATQVGQLIEAINGESVLGKRHY 198

  Fly   188 EVARMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGN---A 249
            :||||||.|..||...:||:.|..:   ..|....:|.:|.      ...|.|:|||:.|.   .
 Worm   199 QVARMLKSIRRGEECIIRLIAPKSA---DPGTMKMTRKTGG------DLAKGTIRFKSEGGFAVE 254

  Fly   250 QIEPQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTD 314
            .|:.|..:|.:.|  .:|.|.:.::|:.|.:||.:||:...........:|||..|:|..|.|.|
 Worm   255 DIQDQMIQAEMCG--KLNELFDQYLGVQDDQLAMRIWETASNCETLWQLSEAIKQSELSMFEFPD 317

  Fly   315 DFIIELWGAITDARRK 330
            ..:.::||.|.|.:|:
 Worm   318 GLVFDMWGIIGDLKRE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_652028.1 PDZ_GIPC 123..211 CDD:467191 42/88 (48%)
GH2_GIPC 263..324 CDD:409666 18/60 (30%)
gipc-2NP_501810.2 PDZ_GIPC 133..222 CDD:467191 42/88 (48%)
GH2_GIPC 262..327 CDD:409666 20/66 (30%)

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