DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment kermit and gipc-1

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_498017.1 Gene:gipc-1 / 175649 WormBaseID:WBGene00016440 Length:357 Species:Caenorhabditis elegans


Alignment Length:328 Identity:120/328 - (36%)
Similarity:185/328 - (56%) Gaps:31/328 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 SRSSMNSGSSQGS----------HISNNNNNSIPEKTKPPLV------FHCQLAHGSPTGLIHDF 71
            ||.:.|..|:.||          .|:..::::|.....|.:|      |.||:|||||.|:|..:
 Worm    17 SRGAFNRSSNHGSVLPIQPAVLDSIAEESSSTIMTVVNPLMVAARQLKFACQMAHGSPVGIIDKW 81

  Fly    72 SSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGRPKEIEIVKSQD 136
            :::.||||.||:||.||:.||:|.|:|..|.||..:..|.:...|.:|||.:|:..|:.:||...
 Worm    82 NNMEELYQSIADCFTISKDDIIFLTVNDFKPDMKNMFTGTLNFKDMLFAHIRGQATELRVVKDAK 146

  Fly   137 ALGLTITDNGAGYAFIKRIKEDSIIDRIEHIS-VGDHIEKLNGQNMVGKRHYEVARMLKDIATGE 200
            ..|:||||||.|.||||.|..||:.||:...: ||..||.:||:.::|||||:|||:||::..||
 Worm   147 NFGVTITDNGLGNAFIKVISPDSVFDRMRPATQVGQLIEAVNGECVLGKRHYQVARILKNVRRGE 211

  Fly   201 TFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYGSGKETLRFKANGNAQIE---PQFDEATVAG 262
            ...:||:.| ::...|     ..:.:|..||   |..|.|:|||:.|...:|   .|..:|.:.|
 Worm   212 ECVVRLIAP-KTADPG-----TMKTTGKTGG---GLAKGTIRFKSEGGFAVEDVQDQMIQAEMCG 267

  Fly   263 IEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTDDFIIELWGAITDA 327
              .:|.:.:.::|:.|.:||.:||:........:..:|||..|:|..|.|.|..:.::||.|.|.
 Worm   268 --KLNEIFDQYLGVQDDQLAMRIWETASNCETLLQLSEAIKESELSMFDFPDGMVFDMWGIIGDL 330

  Fly   328 RRK 330
            :|:
 Worm   331 KRE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 39/81 (48%)
gipc-1NP_498017.1 PDZ_signaling 138..218 CDD:238492 39/79 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166733
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3938
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 214 1.000 Inparanoid score I2343
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52512
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm14544
orthoMCL 1 0.900 - - OOG6_105547
Panther 1 1.100 - - O PTHR12259
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5104
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.800

Return to query results.
Submit another query.