DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc2

DIOPT Version :9

Sequence 1:NP_001286187.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001120269.1 Gene:gipc2 / 100145322 XenbaseID:XB-GENE-946803 Length:331 Species:Xenopus tropicalis


Alignment Length:340 Identity:170/340 - (50%)
Similarity:232/340 - (68%) Gaps:23/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSI-----PEKTKPPLVFHCQLA 60
            |||..|...|............|....|..|.....::::.|.:.     |...:|.||||.|||
 Frog     1 MPLGLRVKKKNKSKEASSKLVESDEIDNRASGSAGKVTSSANGAAGLPPPPVSLRPKLVFHTQLA 65

  Fly    61 HGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGR 125
            ||||||.|..|::|:|||.||||.|.|:.::|||||||:||:||.:||||||||:||||||.||.
 Frog    66 HGSPTGRIEGFTNVKELYSKIAEAFLITPEEILFCTLNTHKIDMDKLLGGQIGLEDFIFAHVKGT 130

  Fly   126 PKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVA 190
            .||:||:||:|||||||||||||.|||||||:||.||:::.|:||||||.:||:|:||.||||||
 Frog   131 KKEVEILKSEDALGLTITDNGAGIAFIKRIKDDSTIDKVKVINVGDHIEAINGKNIVGSRHYEVA 195

  Fly   191 RMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYG---SGKETLRFKANGNAQIE 252
            :|||::..|:||||:|:||::: |:.|.||::       |||..|   :|:||||.::.|.|.:|
 Frog   196 KMLKELEKGQTFTLKLIEPLKA-FEMIEPRAR-------GGKTEGKISTGRETLRLRSKGPATVE 252

  Fly   253 ---PQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTD 314
               ..|:|   ..|:.:::||||:|||.|.|||:.:.:.|..|.|..:||.|:|.: |..|.|.|
 Frog   253 ELPSAFEE---KAIKKVDDLLESYMGIRDVELAATMVEAGRDKKNPDEFAVALDET-LGDFSFPD 313

  Fly   315 DFIIELWGAITDARR 329
            :|:.::||||.||::
 Frog   314 EFVFDVWGAIGDAKQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_001286187.1 PDZ_signaling 126..207 CDD:238492 56/80 (70%)
gipc2NP_001120269.1 PDZ_signaling 132..210 CDD:238492 55/77 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 122 1.000 Domainoid score I5574
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 316 1.000 Inparanoid score I2505
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1442796at2759
OrthoFinder 1 1.000 - - FOG0001655
OrthoInspector 1 1.000 - - otm49466
Panther 1 1.100 - - LDO PTHR12259
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5104
SonicParanoid 1 1.000 - - X1053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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