DRSC/TRiP Functional Genomics Resources

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Protein Alignment kermit and gipc2

DIOPT Version :10

Sequence 1:NP_652028.1 Gene:kermit / 46027 FlyBaseID:FBgn0010504 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_001120269.1 Gene:gipc2 / 100145322 XenbaseID:XB-GENE-946803 Length:331 Species:Xenopus tropicalis


Alignment Length:340 Identity:170/340 - (50%)
Similarity:232/340 - (68%) Gaps:23/340 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPLFTRKSPKQGPTSDGGSQFGSRSSMNSGSSQGSHISNNNNNSI-----PEKTKPPLVFHCQLA 60
            |||..|...|............|....|..|.....::::.|.:.     |...:|.||||.|||
 Frog     1 MPLGLRVKKKNKSKEASSKLVESDEIDNRASGSAGKVTSSANGAAGLPPPPVSLRPKLVFHTQLA 65

  Fly    61 HGSPTGLIHDFSSVRELYQKIAECFDISEKDILFCTLNSHKVDMTRLLGGQIGLDDFIFAHRKGR 125
            ||||||.|..|::|:|||.||||.|.|:.::|||||||:||:||.:||||||||:||||||.||.
 Frog    66 HGSPTGRIEGFTNVKELYSKIAEAFLITPEEILFCTLNTHKIDMDKLLGGQIGLEDFIFAHVKGT 130

  Fly   126 PKEIEIVKSQDALGLTITDNGAGYAFIKRIKEDSIIDRIEHISVGDHIEKLNGQNMVGKRHYEVA 190
            .||:||:||:|||||||||||||.|||||||:||.||:::.|:||||||.:||:|:||.||||||
 Frog   131 KKEVEILKSEDALGLTITDNGAGIAFIKRIKDDSTIDKVKVINVGDHIEAINGKNIVGSRHYEVA 195

  Fly   191 RMLKDIATGETFTLRLVEPVRSGFQGIGPRSQSRASGSAGGKNYG---SGKETLRFKANGNAQIE 252
            :|||::..|:||||:|:||::: |:.|.||::       |||..|   :|:||||.::.|.|.:|
 Frog   196 KMLKELEKGQTFTLKLIEPLKA-FEMIEPRAR-------GGKTEGKISTGRETLRLRSKGPATVE 252

  Fly   253 ---PQFDEATVAGIEAINNLLESFMGINDTELASQIWDLGDQKSNSMDFAEAIDNSDLESFGFTD 314
               ..|:|   ..|:.:::||||:|||.|.|||:.:.:.|..|.|..:||.|:|.: |..|.|.|
 Frog   253 ELPSAFEE---KAIKKVDDLLESYMGIRDVELAATMVEAGRDKKNPDEFAVALDET-LGDFSFPD 313

  Fly   315 DFIIELWGAITDARR 329
            :|:.::||||.||::
 Frog   314 EFVFDVWGAIGDAKQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
kermitNP_652028.1 PDZ_GIPC 123..211 CDD:467191 61/87 (70%)
GH2_GIPC 263..324 CDD:409666 26/60 (43%)
gipc2NP_001120269.1 PDZ_GIPC2 126..218 CDD:467291 62/92 (67%)
GH2_GIPC 259..323 CDD:409666 27/67 (40%)

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