DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NAT1 and Eif4g2

DIOPT Version :9

Sequence 1:NP_001033943.2 Gene:NAT1 / 46020 FlyBaseID:FBgn0010488 Length:1488 Species:Drosophila melanogaster
Sequence 2:NP_001017374.2 Gene:Eif4g2 / 361628 RGDID:1305294 Length:906 Species:Rattus norvegicus


Alignment Length:1082 Identity:375/1082 - (34%)
Similarity:545/1082 - (50%) Gaps:249/1082 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   464 SASAAGGGTPHSQQQQERSQAGKA----STPPPITGRWIPP-SLR------PQHGLTQSEKNDAV 517
            |||:.|||:..:.|...:: ||.:    .||.....:|||. |.|      ..:...:.|::||:
  Rat    14 SASSGGGGSRGAPQHYPKT-AGNSEFLGKTPGQNAQKWIPARSTRRDDNSAANNSANEKERHDAI 77

  Fly   518 FRRVRGILNKLTPEKFQELSDELLKLDLNSIAILKGVILLIFDKALDEPKYSSMYAQLCKRLSEE 582
            ||:|||||||||||||.:|..|||.:.:.|..|||||||||.||||:||||||:|||||.||:|:
  Rat    78 FRKVRGILNKLTPEKFDKLCLELLNVGVESKLILKGVILLIVDKALEEPKYSSLYAQLCLRLAED 142

  Fly   583 APSFD-----KEP--SNSSTFLRLLIAVCRDKFNNRLKR----DENDNRPPPENEADEEERRHLA 636
            ||:||     .:|  ..|:||.||||:..:|:|.||.:.    |:.:|...||    |||:|.:|
  Rat   143 APNFDGPAAEGQPGQKQSTTFRRLLISKLQDEFENRTRNVDVYDKRENPLLPE----EEEQRAIA 203

  Fly   637 KQRMLGNVKFIGELNKLDMLSKNVLHQCIMELFDKKKKRTAGTQEMCEDMECLAQLLKTCGKNLD 701
            |.:||||:||||||.|||::.:::||:||..|.:|||:  ...::|.||:|||.|:::|.|..||
  Rat   204 KIKMLGNIKFIGELGKLDLIHESILHKCIKTLLEKKKR--VQLKDMGEDLECLCQIMRTVGPRLD 266

  Fly   702 SEQGKELMNQYFEKLERRSKSSEYPPRIRFMLKDVIELRQNNWVPRKLGTTEGPVPIKQIRSD-- 764
            .|:.|.||:|||.::.....|.|.|.||||:|:|.:|||:::|||||.....||..|.|||.|  
  Rat   267 HERAKSLMDQYFARMCSLMLSKELPARIRFLLQDTVELREHHWVPRKAFLDNGPKTINQIRQDAV 331

  Fly   765 ---------------DDSIIRTPF-PNRNRDMRNNDRDSDSWMNRFHLNIQP-GGYNDMF----- 807
                           :|..:..|| |.|.:    .|||             | ||..|||     
  Rat   332 KDLGVFIPAPMAQGRNDFFLEGPFMPPRMK----MDRD-------------PLGGLADMFGQMPG 379

  Fly   808 SGLSVTGASPIVSPFATSNRDRDRDNRQYNNRG------DRNRDRDQGGSGGANYGNRYNKHNQN 866
            ||:. ||...|...|:.: ..|.|.|:.:|..|      .:::..:.||....:.|.....|||:
  Rat   380 SGIG-TGPGVIQDRFSPT-MGRHRSNQLFNGHGGHIMPPTQSQFGEMGGKFMKSQGLSQLYHNQS 442

  Fly   867 GGGSGGGSSNNRDRDDSRRNNDRDRDRNDGQYGGNQLLG-SKELAPRFKRNLITTNQDAVENLQM 930
            .|..                              :||.| ||::.|||.:.    .|...:.:.:
  Rat   443 QGLL------------------------------SQLQGQSKDMPPRFSKK----GQLNADEISL 473

  Fly   931 RPAANSLLFRAASQNQKFPATLPMST--PPNSSGSNNQGSSQGQLSNSHYPMLGTPTSHLINPTR 993
            |||.:.|:    ::|| .|...|..|  ||::.....|....||.     |.||..|    ||. 
  Rat   474 RPAQSFLM----NKNQ-VPKLQPQITMIPPSAQPPRTQTPPLGQT-----PQLGLKT----NPP- 523

  Fly   994 PSSTPSAEYADNRTLLGVQQERGLKATSSSPNFSSGAEKLDLDGQAGRKGSHDGKDQGKNGSVER 1058
                             :.||:..|.:...|                                  
  Rat   524 -----------------LIQEKPAKTSKKPP---------------------------------- 537

  Fly  1059 PSTPAGGIGSAKQQKKDKGPNKEELSKKASQYFKDRFYYDEEEDAEVTEIEIKDIDETKTEEADA 1123
                               |:||||.|..              :|.|||.    ::.....:|  
  Rat   538 -------------------PSKEELLKLT--------------EAVVTEY----LNSGNANDA-- 563

  Fly  1124 APVEVSEVKEDAAIPVTTPDRFTKLVDGFLELKLPEKALKDVCINLLMEVLDRVNDVFLERAVRL 1188
                                     |.|..|::.|:..|.::...:::..||| :|...|:|..|
  Rat   564 -------------------------VSGVREMRAPKHFLPEMLSKVIILSLDR-SDEDKEKASSL 602

  Fly  1189 LQTLRKQSNIKPNIVVEIFKQVVNKMNEREALNPRIVSLVASLLAKTICEPALLKLSDIANFTDN 1253
            :..|:::.....:..::.|..|:.:..:.|...|.:.|.:|...|:.|.. .|:.:|::|...::
  Rat   603 ISLLKQEGIATSDNFMQAFLNVLEQCPKLEVDIPLVKSYLAQFAARAIIS-ELVSISELAQPLES 666

  Fly  1254 GQHYPLFLLVLQQLVKVIGKDALEEKFRASKVDLMNSLPEADRNKERLAGILEDRKLSFLYPLLK 1318
            |.|:|||||.||||.|:..::.|.|.|:.|||::...|||.|:||:|:..|||.:.||||:||||
  Rat   667 GTHFPLFLLCLQQLAKLQDREWLTELFQQSKVNMQKMLPEIDQNKDRMLEILEGKGLSFLFPLLK 731

  Fly  1319 VQAEMLKQLQSDPNPNNFYKWIKANVDNKYYKDPGFIQALMTVVVKYVTKETT-LADNLDPKEHP 1382
            ::.|:|||::.||:|...|||||.|:..|.:.|.||:..|||..::|::.|.: .:|..|....|
  Rat   732 LEKELLKQIKLDPSPQTIYKWIKDNISPKLHVDKGFVNILMTSFLQYISSEVSPPSDETDSSSAP 796

  Fly  1383 EKSVTQKEQQLLENYSQMLQTFLGQN-ELQLMALYALQTFCYNENFPKGMLCRWFKYLYESEIIE 1446
            .|...::|:|||.::..::|.||..: :||:.||||||..|||.:||||||.|:|.:.|:.||||
  Rat   797 SKEQLEQEKQLLLSFKPVMQKFLHDHVDLQVSALYALQVHCYNSSFPKGMLLRFFVHFYDMEIIE 861

  Fly  1447 EEAFVLWKEEISDKYPGKGSALFQVNAWLTWLQEAESEDDED 1488
            ||||:.|||:|:.::||||.||||||.|||||:.||.|:.|:
  Rat   862 EEAFLAWKEDITQEFPGKGKALFQVNQWLTWLETAEEEESEE 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NAT1NP_001033943.2 MIF4G 518..743 CDD:280935 124/235 (53%)
RAM <817..865 CDD:291966 11/53 (21%)
MA3 1128..1241 CDD:214714 21/112 (19%)
W2_eIF4G1_like 1314..1460 CDD:211397 69/147 (47%)
Eif4g2NP_001017374.2 MIF4G 78..308 CDD:280935 124/235 (53%)
MA3 543..656 CDD:214714 29/159 (18%)
W2_eIF4G1_like 739..875 CDD:211397 62/135 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352762
Domainoid 1 1.000 225 1.000 Domainoid score I2462
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 562 1.000 Inparanoid score I1049
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D537108at33208
OrthoFinder 1 1.000 - - FOG0004422
OrthoInspector 1 1.000 - - oto96905
orthoMCL 1 0.900 - - OOG6_107094
Panther 1 1.100 - - O PTHR23253
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4221
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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