DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and MPD1

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_014931.3 Gene:MPD1 / 854462 SGDID:S000005814 Length:318 Species:Saccharomyces cerevisiae


Alignment Length:117 Identity:23/117 - (19%)
Similarity:53/117 - (45%) Gaps:16/117 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly  1127 HIEQVNRKMFEKIRKNSDYVAVI-FYSDECKQCPRVLA----EVEHIDDEADKAGIDFVKIDDKQ 1186
            ||.::..|.|:|...|::|.::: ||:..|..|.::.:    ..:.:|.....|.::.....:|.
Yeast    30 HISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGVVQVAAVNCDLNKNKA 94

  Fly  1187 MAKEYGVFALPAIVFFKPTS---KEPV--------IYAGDLYEEEQILTWLI 1227
            :..:|.|...|.::.|:|..   .:|:        .:|.::|...:.|..::
Yeast    95 LCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIV 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259 21/112 (19%)
TRX_family 1433..>1502 CDD:239245
MPD1NP_014931.3 ER_PDI_fam 30..>275 CDD:273457 23/117 (20%)
PDI_a_MPD1_like 30..150 CDD:239300 23/117 (20%)
Blue background indicates that the domain is not in the aligned region.

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