DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hlk and MPD2

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_014553.1 Gene:MPD2 / 854065 SGDID:S000005448 Length:277 Species:Saccharomyces cerevisiae


Alignment Length:267 Identity:53/267 - (19%)
Similarity:88/267 - (32%) Gaps:86/267 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 QQCRKCAKALQELENI---DDEADQLGIGFVKIHDEALADEY--NLGNLPALVYYRHQT-PII-- 250
            |.|:..|...:||..:   ....|...|.|::::.|......  :|...|.:...:.:| |::  
Yeast    57 QHCKTLAPVYEELGELYAKKANKDDTPINFLEVNCEFFGPTLCTDLPGFPIIELVKPRTKPLVLP 121

  Fly   251 ---------YEGELQREEDVLEWLVQNKSTGDEDDVIEDVTSKTLSTLISNIDNL-----VVLFY 301
                     :|...||   :..|....|...|...|:....|:.|.:|.:.||.:     ...|.
Yeast   122 KLDWSSMKFHERLWQR---IKTWFNNPKYQLDTSRVVRFEGSRNLKSLSNFIDTVRSKDTEERFI 183

  Fly   302 DHGNDDSMTVLEELEQIDDDCDKHGIQFVKIDDAKAAADYGIDSIPAIVYFEKEIPNVYDGDLMD 366
            :|..|||....|||......|             ||..:|..|::..:.           ||:..
Yeast   184 EHIFDDSRNCNEELRSQQLLC-------------KAGKEYYSDTLSKLY-----------GDVNG 224

  Fly   367 EEQILKWLLGQLERDEIEDVTDEMLDTMIKEGRVIAVLFYDNNDKKSQKVLEELE---------- 421
            .|                           ||.|.:..|...|.|..|::|.|:|:          
Yeast   225 LE---------------------------KERRRLEALIKQNGDDLSKEVKEKLKIIRLQLSLLS 262

  Fly   422 NIDDECD 428
            :|:|:.:
Yeast   263 HIEDQLE 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457 12/58 (21%)
PDI_a_family 384..479 CDD:239259 12/55 (22%)
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245
MPD2NP_014553.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold <48..170 CDD:469754 23/115 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.