DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and PDIL5-1

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_172274.1 Gene:PDIL5-1 / 837311 AraportID:AT1G07960 Length:146 Species:Arabidopsis thaliana


Alignment Length:135 Identity:32/135 - (23%)
Similarity:58/135 - (42%) Gaps:21/135 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly  1530 ADEIEEVNERMLDRLMAESTLLVVFFYDDDCAECEEILEELEEIDGEADMFGIDFVKIASIQ--- 1591
            |:.|....|...|::..:.|...|.|....|..|:::....|:: |:| |.|.|.:::..:.   
plant    25 AEVITLTPETFSDKIKEKDTAWFVKFCVPWCKHCKKLGNLWEDL-GKA-MEGDDEIEVGEVDCGT 87

  Fly  1592 ---AAKKYEIVNIPSLVYFRKQVPVLYDGDLHQHDKVITWLTSQDVFEIKNEIEEVNRKMLDKL- 1652
               ...|.||.:.|:.:.|       |:|     ::|..:...:||..:|..:.|...|..:|. 
plant    88 SRAVCTKVEIHSYPTFMLF-------YNG-----EEVSKYKGKRDVESLKAFVVEETEKAAEKAQ 140

  Fly  1653 LEENE 1657
            ||:.|
plant   141 LEDKE 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245
PDIL5-1NP_172274.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 27..128 CDD:469754 25/114 (22%)
Blue background indicates that the domain is not in the aligned region.

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