DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and APR1

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_192370.1 Gene:APR1 / 825793 AraportID:AT4G04610 Length:465 Species:Arabidopsis thaliana


Alignment Length:417 Identity:85/417 - (20%)
Similarity:151/417 - (36%) Gaps:118/417 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   893 DLMKEEEILEWVIDLHE-----STADVIESVDRKTLQVLINDV---------------EHLA--- 934
            ::.:|.|::| :.|..|     ..|..:|.:| |.|:...||:               .||.   
plant    80 EIAEEVEVVE-IEDFEELAKKLENASPLEIMD-KALEKYGNDIAIAFSGAEDVALIEYAHLTGRP 142

  Fly   935 --VFFYDDECESCSDILEELENIDDDTDKH-GIQ----FVKSNDVK-LAHEIGIFAFPALVYYET 991
              ||..|     ...:..|.....|..:|| ||:    |..|.:|: |....|:|:|     ||.
plant   143 FRVFSLD-----TGRLNPETYRFFDAVEKHYGIRIEYMFPDSVEVQGLVRSKGLFSF-----YED 197

  Fly   992 GVPIMYDGNIASNQDVFN----------------WILEQKADQS------IQLINRDQLFEYIGT 1034
            |           :|:...                ||..|:.|||      |.::..|.:||.:..
plant   198 G-----------HQECCRVRKVRPLRRALKGLKAWITGQRKDQSPGTRSEIPVVQVDPVFEGLDG 251

  Fly  1035 KDFLAVVFYKEDDPDSPRVLRHIELIDD-----EAAEY---------GIYIVKMHDK-------- 1077
            .....|.:....:.:...|...:..:|.     .||.|         ...:...|::        
plant   252 GVGSLVKWNPVANVEGNDVWNFLRTMDVPVNTLHAAGYISIGCEPCTKAVLPGQHEREGRWWWED 316

  Fly  1078 LMAKKYGFRNPPGLTYFRKGKYINYDGDIDDEEEVLDWLTSPANMEMTDHIEQVNRKMFE---KI 1139
            ..||:.|         ..||   |...:.||.:...:..::.|::..::::..::|:..|   |:
plant   317 AKAKECG---------LHKG---NVKENSDDAKVNGESKSAVADIFKSENLVTLSRQGIENLMKL 369

  Fly  1140 RKNSDYVAVIFYSDECKQCPRVLAEVEHIDDEADKAGIDFVKI----DDKQMAK-EYGVFALPAI 1199
            ....:...|:.|:..|..|..:.|..:.:.|:...:||...|.    |.|:.|| |..:.:.|.|
plant   370 ENRKEPWIVVLYAPWCPFCQAMEASYDELADKLAGSGIKVAKFRADGDQKEFAKQELQLGSFPTI 434

  Fly  1200 VFFKPTSKEPVIYAGDLYEEEQILTWL 1226
            :.|...|..|:.|..:..:.|.:.::|
plant   435 LVFPKNSSRPIKYPSEKRDVESLTSFL 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457 6/27 (22%)
PDI_a_family 1129..1226 CDD:239259 24/104 (23%)
TRX_family 1433..>1502 CDD:239245
APR1NP_192370.1 APS_reduc 1..465 CDD:273072 85/417 (20%)
Blue background indicates that the domain is not in the aligned region.

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