DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)01289 and TMX1

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_110382.3 Gene:TMX1 / 81542 HGNCID:15487 Length:280 Species:Homo sapiens


Alignment Length:136 Identity:31/136 - (22%)
Similarity:54/136 - (39%) Gaps:27/136 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1404 GELSEEEEVLQWLI-----TQKTEDRIELIT----RQMLE--TMVEETQYLAVYFYKINCNICDQ 1457
            |.|:....||..|:     |......:.:||    |::||  .|:|        ||...|..|..
Human     5 GSLAVPLAVLVLLLWGAPWTHGRRSNVRVITDENWRELLEGDWMIE--------FYAPWCPACQN 61

  Fly  1458 ILEGLELIDDECDVFGIHMVKI---QDPQLAKRYSIKTFPALVYFRNGNPLLFEG-----DLQNE 1514
            :....|...:..:...:::.|:   :.|.|:.|:.|...|.:.:.::|....::|     |..|.
Human    62 LQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIITALPTIYHCKDGEFRRYQGPRTKKDFINF 126

  Fly  1515 QSVLEW 1520
            .|..||
Human   127 ISDKEW 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 15/73 (21%)
TMX1NP_110382.3 PDI_a_TMX 29..129 CDD:239292 22/107 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 218..280
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.