DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hlk and dnajc10

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_001077016.1 Gene:dnajc10 / 557858 ZFINID:ZDB-GENE-070327-1 Length:791 Species:Danio rerio


Alignment Length:801 Identity:151/801 - (18%)
Similarity:270/801 - (33%) Gaps:240/801 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   980 IFAFPALVYYETGVPIMYDGNIASNQDVFNWI-LEQKADQSIQLINRD--QLFEYIGTKDFLAVV 1041
            :|||.|:..:.         :|:|::|.:..: :.::|.      .||  |.|:.      ||:.
Zfish    16 LFAFIAVWLFV---------SISSDEDYYKLLGISREAS------TRDIRQAFKK------LALT 59

  Fly  1042 FYKEDDPDSP-------RVLRHIELIDDEAAEYGIYIVKMHDKLMAKKYGFRNPPGLTYFRKG-- 1097
            .:.:.:|:..       ::.|..|::.||.              :.|||......||...::|  
Zfish    60 MHPDKNPNDETAHDKFLKINRAYEVLKDED--------------LRKKYDKYGEKGLQDEQQGGR 110

  Fly  1098 ----KYINYD-GDIDDEEEVLDWLTSPANMEMTDHIEQVNRKMFEKIRKNSDYVAVIFYSDECKQ 1157
                .|..|| |..||:.|                |..::|..|:....:.:...|.||...|..
Zfish   111 YESWNYYRYDFGIYDDDPE----------------ITTLDRGDFDAAVNSGEVWFVNFYFPRCSH 159

  Fly  1158 CPRVLAEVEHIDDEADKAGIDFVKI------DDKQMAKEYGVFALPAIVFFKP------------ 1204
            |..:.........|.|  |:  ::|      |:..:.:..|:.:.|::..|:.            
Zfish   160 CHDLAPTWREFAKEMD--GV--IRIGAVNCGDNGMLCRSKGINSYPSLYVFRAGMNPEKYFNDRT 220

  Fly  1205 ------------TSKEPVIYAGDLYEE-----EQILTWLITQKDPSGDVIEDLEGERLVHLIEES 1252
                        .||...::.|::|.|     .:.:.||||....:||.:|.....:|..:::  
Zfish   221 KSSLTKFAMQFVKSKVTELWQGNIYSEIERAFAERIGWLITFCADTGDCLESQTRRKLAGMLD-- 283

  Fly  1253 GSIAVYFWNKTK-CDICNSKAARKARLKKERDQHQQEGGAASAAAAFGSEADPSEAAAGGAEDAP 1316
            |.:.|.:.:.|| .|:|.|....                 .|..|.|                  
Zfish   284 GLVNVGWMDCTKQADLCESFEIN-----------------TSTTALF------------------ 313

  Fly  1317 AAGSEGDSPPASAAAPADASTGKQE-DDADGCEQCTKVLEELENIDDDCDKHGITFVKTRDFSVA 1380
                    ||.|:.....:....|. |..:...|..:.|.:||.:.....:|.:...:   :.|:
Zfish   314 --------PPGSSLTQKGSVLFIQSLDTKEIYAQVLQHLPDLEILTKSSFEHKLAHHR---WLVS 367

  Fly  1381 DGYG-----VHEYPAL-------------------------VYFEGGIPNVFEG------ELSEE 1409
            ..:|     .|||..|                         :|.......||:|      |:...
Zfish   368 FSFGRNDLASHEYKKLNALLKNSHIQVGKVDCISDSELCSSLYIHKPCVAVFKGVGIHDFEIHHG 432

  Fly  1410 EEVLQWLITQKTEDRIELITRQMLETMV-EETQYLAVYFYKINCNICDQILEGLELIDDECDVFG 1473
            ::.|..::....|.....:|....|... .|.:...|.|:...|..|..:|.  ||......:||
Zfish   433 KDALYNVVAFAKESVNAHVTTLRPENFPNHEKEPWLVDFFAPWCPPCRALLP--ELRKASIQLFG 495

  Fly  1474 ----------IHMVKIQDPQLAKRYSIKTFPALVYFRNGNPLLFEGDLQNEQSVLEWLIDDDNRE 1528
                      ||      ..|...|:|..:|..|.|...:...:||. .:...:||::.|..|..
Zfish   496 QLKFGTLDCTIH------EGLCNTYNIHAYPTTVIFNKSSIHEYEGH-HSADGILEFIEDLVNPV 553

  Fly  1529 LADEIEEVNERMLDRLMAESTLLVVFFYDDDCAECEEILEELEEIDGEADMF-GIDFVKIASIQA 1592
            :.....|..:.::.|..:..|.: |.||...|..|:.:|.|...:   |.|. ||  |.:.::..
Zfish   554 VVTLGPESFQELVKRRKSSETWM-VDFYAPWCGPCQALLPEWRRM---ARMLSGI--VNVGTVDC 612

  Fly  1593 AKKYEIVNIPSLVYFRKQVPV--LYDGDLHQHDKVIT---WLTSQDVFEIKN-EIEEVNRKMLD- 1650
            .|.:......|:    :..|.  |:..:.::.|:..|   |  .:|.|.:|. .:..:.|..:| 
Zfish   613 QKHHSFCQSESV----RAYPEIRLFPQNSNRRDQYQTYNGW--HRDAFSLKAWALSSLPRASVDL 671

  Fly  1651 -------KLLEENEFLAVFFY 1664
                   |:|...:...:.||
Zfish   672 SPEDFKRKVLGGKDHWVLDFY 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259 20/131 (15%)
TRX_family 1433..>1502 CDD:239245 19/79 (24%)
dnajc10NP_001077016.1 DnaJ 33..>120 CDD:440252 20/112 (18%)
PDI_a_ERdj5_N 128..228 CDD:239301 17/119 (14%)
Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold <276..318 CDD:469754 13/86 (15%)
PDI_a_family 348..443 CDD:239259 14/97 (14%)
PDI_a_ERdj5_C 450..546 CDD:239302 24/104 (23%)
PDI_a_ERdj5_C 552..660 CDD:239302 25/119 (21%)
PDI_a_ERdj5_C 666..772 CDD:239302 6/27 (22%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.