DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and pdia5

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_001107048.1 Gene:pdia5 / 556162 ZFINID:ZDB-GENE-030521-5 Length:528 Species:Danio rerio


Alignment Length:493 Identity:85/493 - (17%)
Similarity:174/493 - (35%) Gaps:124/493 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   800 ETLEIPGKIEEVN-VKMLDKILAENDHVVVFFYAE-----------------------------G 834
            :.:::...||:|| .|...|:|....:|:|.:...                             |
Zfish    30 QAVKVSPLIEKVNDHKDFKKLLRTRTNVLVLYTKSASSGDAHLKLLSDVAQAVKGQGTIAWVNCG 94

  Fly   835 DKKAQKILNELENIDDECEEKDIDFVKTSDDDIDKEYDLPGL--PALAFYRHKFRTIYTGDLMKE 897
            |.:.:|:..::: :|...:.|.::.:...|.....||:.|..  ..:||.:..     .|..:.|
Zfish    95 DSEGRKLCKKVK-VDPSSKTKGVELLHYKDGTFHTEYNRPATFKSMVAFLKDP-----AGAPLWE 153

  Fly   898 EEILEWVIDLHESTADVIESVDRKTLQVLINDVEH-LAVFFYDDECESCSDILEELENIDDDT-- 959
            |         :....||:.....|..:.|:...|. :.:.||...|..|..:....:....:|  
Zfish   154 E---------NPEAKDVVHIESEKDFRKLLKREERPILMMFYAPWCGVCKRMQPIFQQAATETKG 209

  Fly   960 -------DKHGIQFVKSNDVKLAHEIGIFAFPALVYYETGVPI-MYDGNIASNQDVFNWILEQKA 1016
                   :.|..:|   :.||  .|..:..:|...|:|.|..: .|:...|:::|:.:|:...:.
Zfish   210 KYVLAGMNVHPAEF---DGVK--QEFSVKGYPTFCYFEKGKFLHHYENYGATSKDITDWLKNPQP 269

  Fly  1017 DQ-------------SIQLINRDQLFEYIGTKDFLAVVFYK--------------------EDDP 1048
            .|             ::..:..|....::.......::||.                    ..||
Zfish   270 PQPKTPEVPWSESGSAVFHLTDDSFDSFLEEHPSALIMFYAPWCGHCKKMKPEYDDAAETLNKDP 334

  Fly  1049 DSPRVLRHIELIDDEAAEYGIYIVKMHDKLMAKKYGFRNPPGLTYFRKGKYINYDGDIDDEEEVL 1113
            :||.||..::             ..:| |...:::.....|.:.||.||:.......:..:::::
Zfish   335 NSPGVLAAVD-------------TTIH-KSTGERFKISGFPTVKYFEKGEEKYTLPHLRSKDKII 385

  Fly  1114 DWLTSPANM--------EMTDHIEQVNRKMFEKIRKNSDYVAVIFYSDECKQCPRVL------AE 1164
            :||.:|...        ||...:..:..:.|.:..|...:..|:||:..|..|...:      ||
Zfish   386 EWLKNPQAPPPPEKSWDEMPSSVSHLGAEDFRESLKKKKHALVMFYAPWCPHCKNAVPHFTTAAE 450

  Fly  1165 VEHIDDEADKAGIDFVKIDDKQMAKEYGVFALPAIVFF 1202
            :...|.:...|.:|..|..:.::.|:.||...|...::
Zfish   451 MFKEDRKIAYAAVDCTKGQNHELCKQEGVEGYPTFNYY 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457 25/147 (17%)
PDI_a_family 1129..1226 CDD:239259 17/80 (21%)
TRX_family 1433..>1502 CDD:239245
pdia5NP_001107048.1 PDI_b_PDIR_N 36..147 CDD:239365 20/116 (17%)
PDI_a_PDIR 160..264 CDD:239295 22/108 (20%)
PDI_a_PDIR 285..388 CDD:239295 16/116 (14%)
PDI_a_PDIR 407..510 CDD:239295 17/82 (21%)
Blue background indicates that the domain is not in the aligned region.

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