DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)01289 and TMX3

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_061895.3 Gene:TMX3 / 54495 HGNCID:24718 Length:454 Species:Homo sapiens


Alignment Length:389 Identity:79/389 - (20%)
Similarity:143/389 - (36%) Gaps:122/389 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 AKEWGIDEIPSIVLFERGIPHIYEGDLMKED------ELLGWLVH-----------QKRY----- 590
            |.|:|:...|:|.|.:..:.:.|.|...|:|      .:.|.|:.           |||:     
Human    91 ASEFGVRGYPTIKLLKGDLAYNYRGPRTKDDIIEFAHRVSGALIRPLPSQQMFEHMQKRHRVFFV 155

  Fly   591 ---SEIPEVTDEMKDKLVENTEHLAVIFYDKDDKQDMRILNELENIDDELEKEGIVIVRIDNAAE 652
               .|.|     :|:|.::....|.|..|             ..:..:|:..|.:.         
Human   156 YVGGESP-----LKEKYIDAASELIVYTY-------------FFSASEEVVPEYVT--------- 193

  Fly   653 AKEYGLDHLPALIYFENKIPALY----EGDL---MNEDEVLEWLLVQKKTATIEEVTDE---ILV 707
                 |..:||::.|:::...:|    :|||   :|.:....:|.:.  ...:.|:.|.   :.:
Human   194 -----LKEMPAVLVFKDETYFVYDEYEDGDLSSWINRERFQNYLAMD--GFLLYELGDTGKLVAL 251

  Fly   708 TLINEHEYVVVFFTGPCEPGETCEHTLNALESIDDELDEAGIIFVTTEDTGIAKKYNVKTYPRLV 772
            .:|:|....|             |||  .|:||..|               :|:.|      |.:
Human   252 AVIDEKNTSV-------------EHT--RLKSIIQE---------------VARDY------RDL 280

  Fly   773 FFRNRDPLHFTGDLDDEDEVLAWITDDETLEIPGKIEEVNVK--MLDKILAENDHVVVFF--YAE 833
            |.|:   ..| |.:|..|.:...:.|:.|:.....:...|.:  :||:.:...:.:|.|.  ..:
Human   281 FHRD---FQF-GHMDGNDYINTLLMDELTVPTVVVLNTSNQQYFLLDRQIKNVEDMVQFINNILD 341

  Fly   834 GDKKAQ---KILNELENIDDECEEKDIDFVKTSDDDIDKEYDLP-GLPALAFYRHKFRTIYTGD 893
            |..:||   .||..|:.|..:.:...:...|:|.......:.|| |:.::..|     .|||.|
Human   342 GTVEAQGGDSILQRLKRIVFDAKSTIVSIFKSSPLMGCFLFGLPLGVISIMCY-----GIYTAD 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691 33/172 (19%)
ER_PDI_fam 700..>916 CDD:273457 45/205 (22%)
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245
TMX3NP_061895.3 PDI_a_TMX3 27..130 CDD:239298 10/38 (26%)
ER_PDI_fam 29..>346 CDD:273457 63/328 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..454
Di-lysine motif 451..454
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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