DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment l(2)01289 and txndc5

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:XP_005162560.1 Gene:txndc5 / 406289 ZFINID:ZDB-GENE-040426-1951 Length:403 Species:Danio rerio


Alignment Length:491 Identity:97/491 - (19%)
Similarity:160/491 - (32%) Gaps:170/491 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1105 DIDDEEEVLDWLTSPANMEMTDHIEQVNRKMFEKIRKNSDYVAVIFYSDECKQCPRVLAEVEHID 1169
            |.|.||:           |...|...|  :||......:.:. |:|::..|..|.|:......:.
Zfish    21 DNDTEED-----------EHAKHTYTV--EMFNDAISTAPHF-VMFFAPWCGHCQRLQGTWNELA 71

  Fly  1170 D-----EADKAGIDFVKIDDKQMAK----EYGVFALPAIVFFKPTSKEPVIYAG--DLYEEEQIL 1223
            |     ||..|.:  ||:|..:..|    |:|:...|.:..||| .:|.|.|.|  ||   :.:.
Zfish    72 DKYNSMEAPPAYV--VKVDCTKDTKFCSIEHGIRGYPTLKLFKP-EQEAVKYQGPRDL---QALE 130

  Fly  1224 TWLI--TQKDPSGDVIEDLEGERLVHLIEESGSIAVYFWNKTKCDICNSKAARKARLKKERDQHQ 1286
            .|::  .|::|     |:.:.|.....:.|                                  .
Zfish   131 NWMLKTLQEEP-----EEPQSEPEPPKVPE----------------------------------P 156

  Fly  1287 QEGGAASAAAAFGSEADPSEAAAGGAE----DAPAAGSEGDSPPASAAAPADASTGKQEDDADGC 1347
            ::|.....|..|.|.      .|.|:.    .||..|.      ..|.||.             .
Zfish   157 KQGLYELTATNFKSH------IAKGSHFVKFFAPWCGH------CKAMAPT-------------W 196

  Fly  1348 EQCTKVLEELENI---DDDCDKHGITFVKTRDFSVADGYGVHEYPALVYFEGG------------ 1397
            ||.....|..::|   ..||.:|         :.|.....|..||.|::|..|            
Zfish   197 EQLASSFEHSDSIKISKVDCTQH---------YEVCSDNQVRGYPTLLFFTDGEKIDQYKGKRDL 252

  Fly  1398 ------IPNVFEGELSEEE---------EVLQWLITQKTEDRIELITRQML-ETMVEETQYLAVY 1446
                  :.|..:...|::|         |:......:|.|..:.::|.... ||:.:...:  :.
Zfish   253 DSFKEFVDNHVKAAESKDEPEKEEEHTHEIPPSAEPEKQESNVLVLTESNFDETVAKGLSF--IK 315

  Fly  1447 FYKINCNICDQI--------------LEGLELIDDECDVFGIHMVKIQDPQLAKRYSIKTFPALV 1497
            ||...|..|..:              |..:::...:|.|         :..|..|:|::.:|.|:
Zfish   316 FYAPWCGHCKNLAPTWDDLSQKEFPGLTDVKIAKVDCTV---------ERTLCNRFSVRGYPTLL 371

  Fly  1498 YFRNGNPLLFEGDLQNEQSVLEWLIDDDNRELADEI 1533
            .||.|.    :|:..|....||.|.....::..||:
Zfish   372 MFRAGQ----QGEEHNGGRDLESLHSFIMKQARDEL 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259 28/107 (26%)
TRX_family 1433..>1502 CDD:239245 16/83 (19%)
txndc5XP_005162560.1 ER_PDI_fam 33..403 CDD:273457 90/466 (19%)
Thioredoxin_like 34..133 CDD:294274 28/107 (26%)
PDI_a_ERp46 159..259 CDD:239303 26/133 (20%)
PDI_a_ERp46 294..395 CDD:239303 23/115 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.