DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)01289 and p4hb

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_001034820.1 Gene:p4hb / 395048 XenbaseID:XB-GENE-494070 Length:506 Species:Xenopus tropicalis


Alignment Length:625 Identity:133/625 - (21%)
Similarity:230/625 - (36%) Gaps:188/625 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   663 ALIYFENKIPALYEGDLMNEDEVLEWLLVQKKTATIEEVTDEILVTLINEHEYVVVFFTGPCEPG 727
            |::.|...:..:...::..|.:|    ||.||     :..||.|    .::.:::|.|..|    
 Frog     4 AVLLFGCSLLIVARANIPEERDV----LVLKK-----DNFDEAL----KQYPFILVEFYAP---- 51

  Fly   728 ETCEHTLNALESIDDELDEAGIIFVT------------TEDTGIAKKYNVKTYPRLVFFRNRD-- 778
             .|.|    .:::..|.::|..:..:            ||::.:|:::.|:.||.:.||:|.|  
 Frog    52 -WCGH----CKALAPEYEKAAGVLKSEGLPIRLGKVDATEESDLAQEFGVRGYPTIKFFKNGDKA 111

  Fly   779 -PLHFTGDLDDEDEVLAWITDDETLEIPGKIEEVNVKMLDKILAENDHVVV--FFYAEGDKKAQK 840
             |..::...:..| ::.|:............:|..|    ..|.::..|.|  ||.....:.|:.
 Frog   112 SPKEYSAGREAAD-IVNWLKKRTGPAASTLGDEAGV----AALVDSSEVAVIGFFKDPASEPAKV 171

  Fly   841 ILNELENIDDECEEKDIDFVKTSDDDIDKEYDLPGLPALAFYRHKF---RTIYTGDLMKEEEI-- 900
            .|...|.:|      ||.|..||.:....:|:| |...:..:: ||   |..|.||:.|||.:  
 Frog   172 FLQAAEAVD------DIPFGITSSEAAFSKYEL-GKDGIVLFK-KFDEGRNAYEGDITKEEVLSF 228

  Fly   901 -----LEWVIDLHESTADVIESVDRKTLQVLINDVEHLAVFFYDDECESCSDILEELENIDDDTD 960
                 |..||:..|.||.:|...:.||         |: :||..   :|.||..|:||       
 Frog   229 IKANRLPLVIEFTEQTAPMIFGGEIKT---------HI-LFFLP---KSASDYKEKLE------- 273

  Fly   961 KHGIQFVKSNDVKLAHEIGIFAFPALVYYETGVPIMYDGNIASNQDVFNWI-LEQKADQSIQLIN 1024
                      |.|.|    ..:|...:.:     |..|.:...||.:..:. |:::...:::||.
 Frog   274 ----------DFKKA----AASFKGKILF-----IFIDSDHTDNQRILEFFGLKKEECPAVRLIT 319

  Fly  1025 RDQLFEYIGTKDFLAVVFYKEDDPDSPRVLRHIELIDDEAAEYGIYIVKMHDKLMAKKYGFRNPP 1089
            .::..    ||       ||.:..|     ...|.|.:....:....||.|  ||::        
 Frog   320 LEEEM----TK-------YKPESAD-----LSAEAIKEFCDSFLEGKVKPH--LMSQ-------- 358

  Fly  1090 GLTYFRKGKYINYDGDIDDEEEVLDWLTSPANMEMTDHIEQVNRKMFEKIRKNSDYVAVIFYSDE 1154
                           |:.|     ||..:|..:.:..:.|:|   :|.: .||   |.|.||:..
 Frog   359 ---------------DVSD-----DWDKNPVKILVGKNFEEV---VFNE-EKN---VFVEFYAPW 396

  Fly  1155 CKQCPRVLAEVEHIDDE-ADKAGIDFVKIDDKQMAKE-YGVFALPAIVFFKPTSKEPVIYAGDLY 1217
            |..|.::....:.:.:: .|...|...|:|......| ..:.:.|.:.||.         ||   
 Frog   397 CGHCKQLAPIWDQLGEKYKDHENIIIAKMDSTANEIEAVKIHSFPTLKFFP---------AG--- 449

  Fly  1218 EEEQILTWLITQKDPSGDVIEDLEGERLVH----LIEESG 1253
                           .|..:.|..|||.:.    .:|..|
 Frog   450 ---------------PGKNVADYNGERTLEGFSKFLESGG 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691 4/25 (16%)
ER_PDI_fam 700..>916 CDD:273457 57/242 (24%)
PDI_a_family 1129..1226 CDD:239259 21/98 (21%)
TRX_family 1433..>1502 CDD:239245
p4hbNP_001034820.1 ER_PDI_fam 25..474 CDD:273457 129/602 (21%)
pdi_dom 29..133 CDD:273454 25/122 (20%)
PDI_b_family 137..232 CDD:239279 28/106 (26%)
PDI_b'_family 244..347 CDD:239280 32/157 (20%)
PDI_a_PDI_a'_C 368..470 CDD:239293 27/135 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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