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Protein Alignment l(2)01289 and Pdia5

DIOPT Version :9

Sequence 1:	NP_001163065.1	Gene:	l(2)01289 / 46017	FlyBaseID:	FBgn0010482	Length:	1786	Species:	Drosophila melanogaster
Sequence 2:	NP_001014147.1	Gene:	Pdia5 / 360722	RGDID:	1359236	Length:	517	Species:	Rattus norvegicus

Alignment Length:	520	Identity:	104/520 - (20%)
Similarity:	193/520 - (37%)	Gaps:	123/520 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   478 WLTDQTSSDQIEDITD-EMLDLIIEKMPHVAVLFYDKDQKKSQKILAELENIDDEC-DQNDIAFV 540
            ||:....|..||.|:| :.|..::....:|.|| |.:.:..::..|..|..:.... .|..|.:|
  Rat    18 WLSSTKVSSLIERISDPKDLKKLLRTRNNVLVL-YSESEVAAESHLKLLSTVAQAVKGQGTICWV 81

  Fly   541 KIDD---DKEAKEWGIDEIP--------------------------SIVLF---ERGIPHIYEGD 573
            ...|   .|..|:..:|..|                          |||.|   .:| |.::|.|
  Rat    82 DCGDAESRKLCKKMKVDLSPKDKKIELFHYQDGAFHMQYDRAVTLKSIVAFLKDPKG-PPLWEED 145

  Fly   574 LMKEDELLGWLVHQKRYSEIPEVTDEMKD--KLVENTEH-LAVIFYDKDDKQDMRILNELENIDD 635
            ...:|     :||          .|..||  :|::..|. |.::||........||:...:....
  Rat   146 PGAKD-----VVH----------IDSEKDFRRLLKKEEKPLLMMFYAPWCSMCKRIMPHFQKAAT 195

  Fly   636 ELEKEGIVI------VRIDNAAEAKEYGLDHLPALIYFE-NKIPALYEGDLMNEDEVLEWLLVQK 693
            ::....::.      ...:|..|  ||.:...|.:.||| .:....||......::::|||...:
  Rat   196 QVRGHTVLAGMNVYPPEFENIKE--EYNVRGYPTICYFEKGRFLFQYENYGSTAEDIVEWLKNPQ 258

  Fly   694 -------------KTATIEEVTDEILVTLINEHEYVVVFFTGPCEPGETCEHTL-------NALE 738
                         :..::..:|||.....:.||..|:|.|..|     .|.|..       :|.|
  Rat   259 PPQPQVPETPWADEGGSVYHLTDEDFDQFVKEHSSVLVMFHAP-----WCGHCKKMKPEFESAAE 318

  Fly   739 SIDDELDEAGIIFV--TTEDTGIAKKYNVKTYPRLVFFRNRDPLHFTGDLDDEDEVLAWITDDET 801
            .:..:.:.:|::..  .|.:..:|:::::..:|.|.:|:|.:. .....|..:.:.:.|:.:.|.
  Rat   319 VLHGDAESSGVLAAVDATINEALAERFHISAFPTLKYFKNGEQ-QAVPALRTKKKFIEWMQNPEA 382

  Fly   802 LEIPGKI-EEVNVKMLDKI-------LAENDHVVVFFYAEGDKKAQKILNELENIDDECEE---- 854
            ...|... ||....:|..:       |.:..|.:|.|||......:|::.......|..::
  Rat   383 PPPPEPTWEEQQTSVLHLVGDNFRETLKKKKHTLVMFYAPWCPHCKKVIPHFTATADAFKDDRKI 447

  Fly   855 --KDIDFVKTSDDDIDKEYDLPGLPALAFYRH-----KF-------------RTIYTGDLMKEEE 899
              ..:|.||..:.|:.::..:...|...:|.:     |:             ||:..|||.:.|:
  Rat   448 ACAAVDCVKDKNQDLCQQESVKAYPTFHYYHYGKLVEKYESDRTELGFTSFIRTLREGDLKRLEK 512

Fly 900 899
Rat 513 512

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.