DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)01289 and pdia6

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_922915.2 Gene:pdia6 / 322160 ZFINID:ZDB-GENE-030131-879 Length:440 Species:Danio rerio


Alignment Length:347 Identity:71/347 - (20%)
Similarity:124/347 - (35%) Gaps:99/347 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1421 TEDRIELITRQMLETMVEETQYLAVYFYKINCNICDQI----------LEGLELIDDECDVFGIH 1475
            ::|.:||........:::......|.||...|..|..:          |:|:             
Zfish    24 SDDVVELNPSNFNREVIQSDSLWLVEFYAPWCGHCKSLAPEWKKAATALKGI------------- 75

  Fly  1476 MVKI------QDPQLAKRYSIKTFPALVYFRNGN---PLLFEGDLQNEQSV------LEWLIDD- 1524
             ||:      |...|..:|.::.||.:..| .||   |..::|...|:..|      |..|:.| 
Zfish    76 -VKVGAVDADQHNSLGGQYGVRGFPTIKIF-GGNKHKPEDYQGGRTNQAIVDAALNALRSLVKDR 138

  Fly  1525 ------------------DNRELADEIEEVNERMLDRLMAES-TLLVVFFYDDDCAECEEI---- 1566
                              .|::   ::.|:.:...||.:.|| .:.:|.|:...|..|:.:    
Zfish   139 LGGKTGGSDYSRQSGGGAGNKK---DVVELTDDNFDRTVLESDDVWLVEFFAPWCGHCKNLEPEW 200

  Fly  1567 ----LEELEEIDGEADMFGIDFVKIASIQA------AKKYEIVNIPSLVYFRK-QVPVLYDGDLH 1620
                .|..|:..|:        |::|:..|      |.::.|...|::..||| :.|..|.|...
Zfish   201 TAAATEVKEQTKGK--------VRLAAEDATVHQGLASRFGIRGFPTIKVFRKGEEPEDYQGGRT 257

  Fly  1621 QHDKVITWLTSQDVFEIKNEIEEV-NRKMLDKLLEENEFLAVFFYEHNQPDSTAALEKLENIDSE 1684
            :.|.|...|..........|::|| |..:|.|..|:.:...:           |.|..:.:..:.
Zfish   258 RSDIVARALELYSDNIPAPELQEVLNEGILKKTCEDYQLCII-----------AVLPHILDTGAS 311

  Fly  1685 TDNLDITFVK-MADSRYAKKWG 1705
            ..|..:..:| ||:....|.||
Zfish   312 GRNSYLEVMKTMAEKHKKKMWG 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 15/84 (18%)
pdia6NP_922915.2 ER_PDI_fam 25..262 CDD:273457 53/262 (20%)
PDI_a_P5 26..128 CDD:239299 24/116 (21%)
PDI_a_P5 161..266 CDD:239299 26/112 (23%)
P5_C 275..404 CDD:239281 16/70 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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