DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and prtp

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_572742.1 Gene:prtp / 32124 FlyBaseID:FBgn0030329 Length:416 Species:Drosophila melanogaster


Alignment Length:387 Identity:75/387 - (19%)
Similarity:135/387 - (34%) Gaps:134/387 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1331 APADASTGKQEDD------------------------ADGCEQCTKV------LEELENIDD--- 1362
            |..:..||||:..                        |..|..|.::      |.|:.|:|:   
  Fly    25 ASQEEDTGKQDKQFTVELDPETFDTAIAGGNVFVKFFAPWCGHCKRIQPLWEQLAEIMNVDNPKV 89

  Fly  1363 -----DCDKHGITFVKTRDFSVADGYGVHEYPALVYFEGGIPNVFEGELSEEEEV---------- 1412
                 ||.||.         .:...:.|..||.|..|          :|.|||.|          
  Fly    90 IIAKVDCTKHQ---------GLCATHQVTGYPTLRLF----------KLGEEESVKFKGTRDLPA 135

  Fly  1413 ----LQWLITQKTEDRIELITRQMLET--------MVEET--QYLA-----VYFYKINCNICDQI 1458
                :...::...|..:..:.|:.:|.        :.|:|  ::::     |.|:...|:.|.::
  Fly   136 ITDFINKELSAPAEADLGEVKREQVENLNIGKVVDLTEDTFAKHVSTGNHFVKFFAPWCSHCQRL 200

  Fly  1459 L---EGL--ELIDDECDVFGIHMVKIQDPQ---LAKRYSIKTFPALVYFRNGNPL-LFEG--DLQ 1512
            .   |.|  |||.:..    :.:.||...|   :.:.:.:|.:|.|::..:|..: .:.|  ||.
  Fly   201 APTWEDLAKELIKEPT----VTISKIDCTQFRSICQDFEVKGYPTLLWIEDGKKIEKYSGARDLS 261

  Fly  1513 NEQSVLEWLI----DDDNRELADE---IEEV----------------NERMLDRLMAESTLLVVF 1554
            ..::.:|.::    :....|..||   ||||                .|...|:.:||....:. 
  Fly   262 TLKTYVEKMVGVPLEKTAGEAGDEKVVIEEVAGEEDAAKKLTPQQLTGEDEFDQAIAEGVAFIK- 325

  Fly  1555 FYDDDCAECEEILEELEEIDGEADMFGIDFVKIASI--------QAAKKYEIVNIPSLVYFR 1608
            ||...|..|:::....|::..|... ....||||.:        |.....::...|:|..::
  Fly   326 FYAPWCGHCQKLQPTWEQLATETHQ-AQSSVKIAKVDCTAPENKQVCIDQQVEGYPTLFLYK 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 18/91 (20%)
prtpNP_572742.1 PDI_a_ERp46 38..140 CDD:239303 21/120 (18%)
PDI_a_ERp46 167..267 CDD:239303 21/103 (20%)
PDI_a_ERp46 303..407 CDD:239303 17/86 (20%)
Blue background indicates that the domain is not in the aligned region.

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