DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and Pdia6

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_001004442.1 Gene:Pdia6 / 286906 RGDID:628688 Length:445 Species:Rattus norvegicus


Alignment Length:395 Identity:84/395 - (21%)
Similarity:141/395 - (35%) Gaps:101/395 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1421 TEDRIELITRQMLETMVEETQYLAVYFYKINCNICDQIL----EGLELIDDECDVFGIHMVKIQD 1481
            ::|.|||........:::......|.||...|..|.::.    :....:.|...|..::..|.| 
  Rat    29 SDDVIELTPSNFNREVIQSDSLWLVEFYAPWCGHCQRLTPEWKKAASALKDVVKVGAVNADKHQ- 92

  Fly  1482 PQLAKRYSIKTFPALVYF--RNGNPLLFEGDLQNEQ------SVLEWLIDD-------------- 1524
             .|..:|.::.||.:..|  ....|..::|....|.      |.|..|:.|              
  Rat    93 -SLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALRQLVKDRLGGRSGGYSSGKQ 156

  Fly  1525 ---DNRELADEIEEVNERMLDRLMAESTLLVVFFYDDDCAECEEI--------LEELEEIDGEAD 1578
               |:....|.:|..::.....::....:.:|.||...|..|:.:        .|..|:..|:  
  Rat   157 GRGDSSSKKDVVELTDDTFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAATEVKEQTKGK-- 219

  Fly  1579 MFGIDFVKIASIQA------AKKYEIVNIPSLVYFRK-QVPVLYDGDLHQHDKVITWLTSQDVF- 1635
                  ||:|::.|      |.:|.|...|::..|:| :.||.|||...:.|.|...|   |:| 
  Rat   220 ------VKLAAVDATVNQVLASRYGIKGFPTIKIFQKGESPVDYDGGRTRSDIVSRAL---DLFS 275

  Fly  1636 ------EIKNEIEEVNRKMLDKLLEENEFLAVFFYEH-NQPDSTAALEKLENIDSETDNLDITFV 1693
                  |:   :|.:|..:..|..||::...|....| ....:|.....||           ..:
  Rat   276 DNAPPPEL---LEIINEDIAKKTCEEHQLCVVAVLPHILDTGATGRNSYLE-----------VLL 326

  Fly  1694 KMADSRYAKKWGVT-------------------KLPAM--VYFRRRFPSIYRGDLLSEDEVLEWL 1737
            |:||....|.||..                   ..|||  :..|:...::.:|. .||..:.|:|
  Rat   327 KLADKYKKKMWGWLWTEAGAQYELENALGIGGFGYPAMAAINARKMKFALLKGS-FSEQGINEFL 390

  Fly  1738 RKNRF 1742
            |:..|
  Rat   391 RELSF 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 14/74 (19%)
Pdia6NP_001004442.1 PDI_a_P5 31..133 CDD:239299 21/103 (20%)
PDI_a_P5 166..271 CDD:239299 27/112 (24%)
P5_C 280..409 CDD:239281 28/131 (21%)
Blue background indicates that the domain is not in the aligned region.

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