DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(2)01289 and pdi-6

DIOPT Version :9

Sequence 1:NP_001163065.1 Gene:l(2)01289 / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:NP_509190.1 Gene:pdi-6 / 180974 WormBaseID:WBGene00015168 Length:440 Species:Caenorhabditis elegans


Alignment Length:388 Identity:69/388 - (17%)
Similarity:143/388 - (36%) Gaps:89/388 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1420 KTEDRIELITRQMLETMVEETQYLAVYFYKINCNICDQIL----EGLELIDDECDVFGIHMVKIQ 1480
            |.:|.:||........::.......|.||...|..|..::    :....:.....|..:.|.  |
 Worm    22 KKDDVVELTEANFQSKVINSDDIWIVEFYAPWCGHCKSLVPEYKKAASALKGVAKVGAVDMT--Q 84

  Fly  1481 DPQLAKRYSIKTFPALVYF--RNGNPLLFEGDLQNEQSVLEWLIDDDNRELA------------- 1530
            ...:...|:::.||.|..|  ....|..:.|. :..|::.:.::.:..:.::             
 Worm    85 HQSVGGPYNVQGFPTLKIFGADKKKPTDYNGQ-RTAQAIADSVLAEAKKAVSARLGGKSSGSSSS 148

  Fly  1531 ---------------DEIEEVNERMLDRLMAES-TLLVVFFYDDDCAECEEILEE----LEEIDG 1575
                           :|:.|:.:...:.|:..| .:.:|.|:...|..|:.:..:    ..|:.|
 Worm   149 GSGSGSGKRGGGGSGNEVVELTDANFEDLVLNSKDIWLVEFFAPWCGHCKSLEPQWKAAASELKG 213

  Fly  1576 EADMFGIDFVKIASIQ--AAKKYEIVNIPSLVYFRKQVPVL----YDGDLHQHDKVITWLT--SQ 1632
            :..:..:|    |::.  .|.|:.|...|::.||.....|.    |||. .|...::.|.:  :|
 Worm   214 KVRLGALD----ATVHTVVANKFAIRGFPTIKYFAPGSDVSDAQDYDGG-RQSSDIVAWASARAQ 273

  Fly  1633 DVFEIKNEIEEVNRKMLDKLLEENEFLAVFFYEHNQPDSTAALEKLENIDSETDNLDITFVKMAD 1697
            :........|.:|:::::...:|.: |.:|          |.|..:.:..||..|..:..:|...
 Worm   274 ENMPAPEVFEGINQQVVEDACKEKQ-LCIF----------AFLPHILDCQSECRNNYLAMLKEQS 327

  Fly  1698 SRYAKK-WGVTKL-------------------PAM--VYFRRRFPSIYRGDLLSEDEVLEWLR 1738
            .::.|. ||...:                   |||  :.||:...::.:|. ..:|.:.|:||
 Worm   328 EKFKKNLWGWIWVEGAAQPALEESFEVGGFGYPAMTALNFRKNKYAVLKGS-FGKDGIHEFLR 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(2)01289NP_001163065.1 PDI_a_family 50..145 CDD:239259
PDI_a_family 384..479 CDD:239259
Thioredoxin_6 510..689 CDD:404691
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 13/74 (18%)
pdi-6NP_509190.1 PDI_a_P5 25..127 CDD:239299 19/104 (18%)
PDI_a_P5 165..269 CDD:239299 24/108 (22%)
P5_C 278..407 CDD:239281 24/124 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0191
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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