DRSC/TRiP Functional Genomics Resources

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Protein Alignment hlk and LOC1273599

DIOPT Version :10

Sequence 1:NP_001163065.1 Gene:hlk / 46017 FlyBaseID:FBgn0010482 Length:1786 Species:Drosophila melanogaster
Sequence 2:XP_312592.5 Gene:LOC1273599 / 1273599 VectorBaseID:AGAMI1_011399 Length:319 Species:Anopheles gambiae


Alignment Length:304 Identity:73/304 - (24%)
Similarity:128/304 - (42%) Gaps:68/304 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1433 LETMVEET--------QYLAVYFYKINCNICDQILEGLELIDDEC-DVFGIHMVKIQDPQLAKRY 1488
            |||:.|:.        ....|.|.|.||..||:....|..:..|. |....|.||.....:|:.|
Mosquito    22 LETVSEDDLVKKFHSHNNFIVLFSKPNCADCDKFEAILSKLKQEIEDNLQAHAVKAVSSSMARLY 86

  Fly  1489 SIKTFPALVYFRNGNPLLFEGDLQNEQSVLEWLI---DDDNRELADEIEEVNERMLDRLMAESTL 1550
            |....||:||||:|.|||::|.:: |.:::..||   |.:.:||:||..|    .|.:..:.:|.
Mosquito    87 SPSKEPAVVYFRHGVPLLYDGAIE-EDALIGKLIQNKDPNVKELSDETFE----HLTQASSGATT 146

  Fly  1551 --LVVFFYDDDCAECEEILEELEEIDGEADMFGIDFVKIASIQ-------AAKKYEIVNIPSLVY 1606
              ..:.||..:|.:|:.:....|.:  .||:  ...:.:|.:|       .|.::::..:|..|:
Mosquito   147 GDWFIMFYTTNCVDCQRLTAVWEAV--AADL--KTRMNVARVQKDGKGSETAARFQVKKVPDFVF 207

  Fly  1607 FRKQVPVLYDGDLHQHDKVITWLTSQDVFE-IKNEIEEVNRKMLDKLLEENEFLAVFFYEHNQPD 1670
            .|:.....|:...:.....:::  :||.:: .|.|...|.....|.|:|                
Mosquito   208 LRQGKYYRYEISKYDIKSFVSF--AQDWYKNAKAERVPVPLSPFDNLVE---------------- 254

  Fly  1671 STAALEKLENIDSETDNLDITFVKMADSRYAKKWGVTKLPAMVY 1714
                             |.:.::|.|.:.|||.:  ::.|.:||
Mosquito   255 -----------------LAVQYLKDAPNMYAKLY--SEYPMVVY 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hlkNP_001163065.1 PDI_a_family 50..145 CDD:239259
ER_PDI_fam 381..>670 CDD:273457
PDI_a_family 384..479 CDD:239259
ER_PDI_fam 700..>916 CDD:273457
PDI_a_family 1129..1226 CDD:239259
TRX_family 1433..>1502 CDD:239245 26/77 (34%)
LOC1273599XP_312592.5 None
Blue background indicates that the domain is not in the aligned region.

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