DRSC/TRiP Functional Genomics Resources

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Protein Alignment tutl and LSAMP

DIOPT Version :9

Sequence 1:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster
Sequence 2:NP_001305844.1 Gene:LSAMP / 4045 HGNCID:6705 Length:361 Species:Homo sapiens


Alignment Length:386 Identity:98/386 - (25%)
Similarity:146/386 - (37%) Gaps:69/386 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 IRRGQGSTPTPTIQVLQFVLVSLLALLAKNAQAHNIP--EDAVHITAILGEGVIFNCHVEFPNDH 158
            :||.|     |..:.|..||:.||.||.......::.  ....:||...|:..|..|.||..|..
Human     2 VRRVQ-----PDRKQLPLVLLRLLCLLPTGLPVRSVDFNRGTDNITVRQGDTAILRCVVEDKNSK 61

  Fly   159 PVPYVLQWDKKVSETGSDLPIYIWYESYPEHIEEGYKGRVSRVSQDSPFGSASLNLTNIRESDQG 223
                 :.|   ::.:|.         .:..|.:.....||....:.|.  ..||.:..:...|:|
Human    62 -----VAW---LNRSGI---------IFAGHDKWSLDPRVELEKRHSL--EYSLRIQKVDVYDEG 107

  Fly   224 WYECKVVFLNRDPKQHKNGT-WFHLDVHAPPRFSVTPEDIIYVNLGDSIILNCQADGTPTPEILW 287
            .|.|.|      ..||:..| ..:|.|..||:.|....|:. ||.|.::.|.|.|:|.|.|.|.|
Human   108 SYTCSV------QTQHEPKTSQVYLIVQVPPKISNISSDVT-VNEGSNVTLVCMANGRPEPVITW 165

  Fly   288 YKDANPVDPSPTVGIFNDGTE--LRISTIRHEDIGEYTCIARNGEGQVSHTARVIIAGGAVIMVP 350
            .      ..:||...| :|.|  |.|..|..|..|:|.|.|.| |...:...:|.:    .:..|
Human   166 R------HLTPTGREF-EGEEEYLEILGITREQSGKYECKAAN-EVSSADVKQVKV----TVNYP 218

  Fly   351 PT-----NQTKLEGEKVIFSCEAKAMPGNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPIK 410
            ||     :.....|.:....|||.|:|. ....|||:.:.:.....||.:.| ....||.:..:.
Human   219 PTITESKSNEATTGRQASLKCEASAVPA-PDFEWYRDDTRINSANGLEIKST-EGQSSLTVTNVT 281

  Fly   411 PDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTF---TPTVQYLPFRLAGVVQCYIKSSP 468
            .:..|.|.|...|.:|          |...:.|.|   .||:.: |.:..|....:.:..|
Human   282 EEHYGNYTCVAANKLG----------VTNASLVLFKRVLPTIPH-PIQEIGTTVHFKQKGP 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutlNP_001303307.1 V-set 137..250 CDD:284989 25/113 (22%)
IG_like 137..229 CDD:214653 20/91 (22%)
I-set 253..341 CDD:254352 30/89 (34%)
IGc2 268..331 CDD:197706 23/64 (36%)
I-set 346..437 CDD:254352 22/95 (23%)
Ig 349..437 CDD:299845 22/92 (24%)
Ig 459..530 CDD:299845 1/10 (10%)
IG_like 549..628 CDD:214653
IGc2 551..617 CDD:197706
FN3 633..725 CDD:238020
FN3 786..874 CDD:238020
LSAMPNP_001305844.1 Ig 38..128 CDD:386229 25/114 (22%)
Ig 132..215 CDD:386229 30/95 (32%)
Ig_3 219..294 CDD:372822 19/76 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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