DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tutl and Dscaml1

DIOPT Version :9

Sequence 1:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster
Sequence 2:NP_001101611.1 Gene:Dscaml1 / 315615 RGDID:1304887 Length:2111 Species:Rattus norvegicus


Alignment Length:1854 Identity:369/1854 - (19%)
Similarity:594/1854 - (32%) Gaps:663/1854 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 NAQAHNIPE--DAVHITAI-------LGEGVIFNCHVEFPNDHPVPYVLQWDKKVSETGSDLPIY 180
            :|:|:.:..  |.:|:|..       :|..||.:|.:                    |||.....
  Rat   360 SAEANGVLTVIDPLHVTLTPKKLKTGIGSTVILSCAL--------------------TGSPEFTI 404

  Fly   181 IWYESYPEHIEEGYKGRVSRVSQDSPFGSASLNLTNIRESDQGWYECKVVFLNRDPKQHKNGTWF 245
            .||.: .|.:..|....:..:|.:      :|.:::.::|..|.|:|   |..|..:..::....
  Rat   405 RWYRN-TELVLPGEAISIRGLSNE------TLLISSAQKSHSGAYQC---FATRKAQTAQDFAII 459

  Fly   246 HLDVHAPPRFSVTPEDIIYVNLGDSIILNCQADGTPTPEILWYKDANPV--DPSPTVGIF--NDG 306
            .|:...|...|...|.:  ||.|:...|.|.|.|.|.|.:.|..|..||  |.|.....:  :||
  Rat   460 VLEDGTPRIVSSFSEKV--VNPGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDG 522

  Fly   307 TELRISTIRH--------EDIGEYTCIARNGEGQVSHTARVIIAGGAVIMVPPT-----NQTKLE 358
            |     ||.|        .|.|.|.|.|||..|...:.||:.:.|      ||:     |.|.:.
  Rat   523 T-----TISHMNVTGPQIRDGGVYRCTARNSVGSAEYQARINVRG------PPSIRAMRNITAVA 576

  Fly   359 GEKVIFSCEAKAMPGNVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI-KPDDSGQYLCEVT 422
            |...:.:|.....| ..:::||::...:.:    ..|..:.::|:|.:..: |..|.|:|||.| 
  Rat   577 GRDTLINCRVIGYP-YYSIKWYKDALLLPD----NHRQVVFENGTLKLTDVQKGMDEGEYLCSV- 635

  Fly   423 NGIGDPQ---SASAYLSVEYPAKVTFTPTVQYLPFRLAGV-----VQCYIKSSPQLQYVTWTKDK 479
              :..||   |.|.:::|:.|      |.:|...|..|.:     :.|.:.|......:||.||.
  Rat   636 --LIQPQLSISQSVHVAVKVP------PLIQPFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDG 692

  Fly   480 RLLEPYQMKDIVVMANG----------SLLFTRVNEEHQGQYACTPYNAQGTAGASGVMDVLVRK 534
            :         :::..:|          ||..:.|:.:|.|.|.|...||..|  .|....::||.
  Rat   693 Q---------VIISGSGVTIESKEFMSSLQISSVSLKHNGNYTCIASNAAAT--VSRERQLIVRV 746

  Fly   535 PPAFTVEP---ETLYQRKVGDSVEMHCDALEAEGTERPTIKWQRQEGEQLTESQRNRIKISG--- 593
            ||.|.|:|   :.:|    |.:..::|   ..:|...|.:.|:..:|.. ...|.:.:.::|   
  Rat   747 PPRFVVQPNNQDGIY----GKAGVLNC---SVDGYPPPKVMWKHAKGSG-NPQQYHPVPLTGRIQ 803

  Fly   594 ----GNITIENLRREDFGYYQCVVSNEVAT------LMAVTQLVIEGTQPHAPYNITGKATE--- 645
                .::.|.::..||.|||.|..||.|.|      .:.|....:..:.|:....|.|.|.|   
  Rat   804 ILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKAMFLTVKIPAMITSHPNTTIAIKGHAKELNC 868

  Fly   646 ----------------------------------------------------------------- 645
                                                                             
  Rat   869 TARGERPIIIRWEKGDTVIDPDRVMRYAIATKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGE 933

  Fly   646 -------------------------SSITLQWLPGYSGGS-------EYKQDYTIW--------- 669
                                     .|:.|:|...:.|.|       |||.....|         
  Rat   934 DRGLIQLTVQEPPDPPELEIREVKARSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNI 998

  Fly   670 ---FREAGVNDWQTISV---------------------------TPSG-------------STQV 691
               ..:|.:.|....||                           .|.|             |.||
  Rat   999 SPTINQANIVDLHPASVYSIRMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQV 1063

  Fly   692 T--------INGL-----------ASGTTYEFQVVGRNVLGD----------------------- 714
            |        .||:           :.|:..::.:|.....||                       
  Rat  1064 TWKAPKKELQNGIIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFN 1128

  Fly   715 ----GMMSKVMTVRTLEDAPA-APRNVKAA-----------TQPPDS------------FFQLMP 751
                |..|..:...||||.|: .|.||:|.           ::||.|            |:.|..
  Rat  1129 RAGTGPSSSEINATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYV 1193

  Fly   752 D---------------------------EADLLAYFDIYFHTDS----RGTLVYSPPKLRVKGPK 785
            |                           ...:|||      |.:    |.:::|    ::.|...
  Rat  1194 DGEWGEMQNVTTTRERVELRGMEKFTNYSVQVLAY------TQAGDGVRSSVLY----IQTKEDV 1248

  Fly   786 PGPPRNV-SVTEVSNGFLITWQSPLERAHIVKFYTI-------------KYRTDAQWKTLNRGQI 836
            ||||..: :|...::..:::|..|.:...:::.|||             :|.|.           
  Rat  1249 PGPPAGIKAVPSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETS----------- 1302

  Fly   837 RPEETQYLVKNLVGGRTYYFRVLA-NSEKSYESSDEVKFPVPARVKHKAITAGVVGGILFFIVAI 900
             ||:..|.:.:|..|:.|...|.| .|.....||::|......:...|.|:.|  |.:....:..
  Rat  1303 -PEQLFYRIAHLNRGQQYLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFG--GTVTTPWLKD 1364

  Fly   901 ILSVC--------AVKICNKRKRRKQEKEFNMVACRITDARNIAANNHHLHNRSTGSISSGQVPL 957
            :...|        |||       ..::.|.:.:...: |...:...|..|..|:..:..||....
  Rat  1365 VRLPCNSVGDPAPAVK-------WTKDSEDSAIPVSL-DGHRLIHTNGTLLLRAVKAEDSGYYTC 1421

  Fly   958 KKYKQTRISSLTAILIAILHWIWPPD--RCTNCHSIYSSPNLEDGDEDDGGGGRRRSVSRIQRSL 1020
               ..|.......|::.:|..: |||  |.|...:..||..|.....|:||...|..|  :|.|:
  Rat  1422 ---TATNTGGFDTIIVNLLVQV-PPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFV--LQYSV 1480

  Fly  1021 DGR------FVLDVEGVSKLG------------YSQQTLESGNV-DVVDGGLFERRNSNVSQKSS 1066
            |..      |:...|...||.            .::.::.||.: ::::.....|      :.|.
  Rat  1481 DNSEEWKDVFISSSERSFKLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGR------EPSF 1539

  Fly  1067 SDDGGFLSRRNFITARAS---WRR---PLVASSSQLSLQS--------AADSARGFLQGL----- 1112
            |.|....:..|...||.:   |..   |:.|...:...:.        |..|...||..|     
  Rat  1540 SKDQHLFTHINSTHARLNLQGWNNGGCPITAIVLEYRPKGTWAWQGVRANSSTEVFLTELREATW 1604

  Fly  1113 --LKIGAKQSA------------------VPP--NSQSYFDE-------------AVSGARYQNV 1142
              |::.|..||                  :||  ::|...|:             |..|.....|
  Rat  1605 YELRMRACNSAGCGNETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFV 1669

  Fly  1143 LRP--------------------YTSSNNLYGNADRSRP----LHINTISGSLSQQ-----QQL- 1177
            :|.                    .:.:|..:....:..|    |||:.....|..:     :|| 
  Rat  1670 VRKKRKEKRLKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLG 1734

  Fly  1178 -------YTPSRISRIFSSSPQQ----LQPHHQQLLLSSGGSGAYPTHFSDLSTVYP---PNSAE 1228
                   .|.:..|:  :.:||.    :..||..|:.|:|       ...|:|.:.|   |.|.:
  Rat  1735 DDKATIPVTDAEFSQ--AVNPQSFCTGVSLHHPALIQSTG-------PLIDMSDIRPGTNPVSRK 1790

  Fly  1229 --RSSHNLSSRYRYYSQ--------ELPSLRTIQEETRRQQQQKQHPL-----EDHFVPLQLPSP 1278
              :|:|  |:|.||.||        ..|: ||:..:.|  ....||.:     :.:...|...:.
  Rat  1791 NVKSAH--STRNRYSSQWTLTKCQASTPA-RTLTSDWR--TVGSQHGVTVTESDSYSASLSQDTD 1850

  Fly  1279 PSWRSYYQSQ---ASYRPRTRWYPRHHSRLFSNRQQQHEMLSPLPQLNLNLRNSMNPGGLEASPE 1340
            ....|...::   ::|....|.|  .|::|  ..|.||...........:..:.....|...:.:
  Rat  1851 KGRNSMVSTESASSTYEELARAY--EHAKL--EEQLQHAKFEITECFISDSSSDQMTTGTNENAD 1911

  Fly  1341 SRSSSSGFGSKNTSNHPGSTSEWRLLPPYRAPPSPPKHSGYFGGQQAQGQTPHGSYSYPRATTPP 1405
            |.:|.|      |.:.||..         |...||||......|:......||.:........|.
  Rat  1912 SMTSMS------TPSEPGIC---------RFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPL 1961

  Fly  1406 YTMAHWLEMISRLNAATDSNLPKAPCPVDVGSVDGHYEFDPATPTPSASSMLREDLNLHIDTHPY 1470
            ||.:   |...|   ..|.   :.||||                .|...:.:|   ||   |..|
  Rat  1962 YTKS---EAFFR---KADG---REPCPV----------------VPPREASMR---NL---TRAY 1995

  Fly  1471 H----HHTLGPLSGSLLHSHAPYGGGARKQRSLP 1500
            |    |.||.|.|..|...| |....|....:||
  Rat  1996 HTQARHLTLDPASKPLGLPH-PGATAATATATLP 2028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutlNP_001303307.1 V-set 137..250 CDD:284989 22/119 (18%)
IG_like 137..229 CDD:214653 19/98 (19%)
I-set 253..341 CDD:254352 33/99 (33%)
IGc2 268..331 CDD:197706 26/74 (35%)
I-set 346..437 CDD:254352 23/99 (23%)
Ig 349..437 CDD:299845 23/96 (24%)
Ig 459..530 CDD:299845 18/85 (21%)
IG_like 549..628 CDD:214653 20/91 (22%)
IGc2 551..617 CDD:197706 17/72 (24%)
FN3 633..725 CDD:238020 32/289 (11%)
FN3 786..874 CDD:238020 24/102 (24%)
Dscaml1NP_001101611.1 IG 101..173 CDD:214652
IGc2 101..168 CDD:197706
Ig 183..276 CDD:299845
IG_like 195..276 CDD:214653
I-set 291..369 CDD:254352 2/8 (25%)
IGc2 298..359 CDD:197706
IGc2 386..447 CDD:197706 18/90 (20%)
I-set 466..560 CDD:254352 34/100 (34%)
Ig 466..556 CDD:299845 32/96 (33%)
IGc2 577..635 CDD:197706 14/62 (23%)
IG_like 665..744 CDD:214653 19/89 (21%)
Ig 673..739 CDD:143165 18/76 (24%)
I-set 748..843 CDD:254352 24/102 (24%)
Ig7_DSCAM 765..843 CDD:143211 18/81 (22%)
I-set 849..942 CDD:254352 5/92 (5%)
Ig 861..949 CDD:299845 3/87 (3%)
FN3 945..1039 CDD:238020 13/93 (14%)
FN3 1046..1143 CDD:238020 13/96 (14%)
fn3 1151..1237 CDD:278470 14/91 (15%)
FN3 1249..1340 CDD:238020 24/102 (24%)
IGc2 1364..1428 CDD:197706 12/74 (16%)
FN3 1442..1532 CDD:238020 21/91 (23%)
FN3 1546..1618 CDD:238020 15/71 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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