DRSC/TRiP Functional Genomics Resources

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Protein Alignment tutl and PALLD

DIOPT Version :9

Sequence 1:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster
Sequence 2:XP_011530070.1 Gene:PALLD / 23022 HGNCID:17068 Length:1468 Species:Homo sapiens


Alignment Length:1483 Identity:275/1483 - (18%)
Similarity:444/1483 - (29%) Gaps:585/1483 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LGSHRWCRALSTQHNTEKSKEQQQQSQPLEIPEQRASKCRGDIDRTTTTTIPASKTLTA-SPAKT 70
            ||.|            ...:.|..:|.|::...::         :|.:.:.|.||...| ||..|
Human   154 LGEH------------ASRRPQDNRSTPVQPLAEK---------QTKSISSPVSKRKPAMSPLLT 197

  Fly    71 AAFTVKTTRRRRSRRRAEGSSICVPIRRGQGSTP-----TPTIQVLQFV--LVSLLALLAKNAQA 128
            ....:      ||.|:||......|....:..||     .|..|:....  |:..|..:.|.|:.
Human   198 RPSYI------RSLRKAEKRGAKTPSTNVKPKTPHQRKGGPQSQLCDKAANLIEELTSIFKAAKP 256

  Fly   129 HNIPEDAVHITAILGEGVIFNCHVEFPNDHPVPYVLQWDKKVSETGSDLPIYIWYESYPEHIEEG 193
            .|                      ..||              .|:.|.              :.|
Human   257 RN----------------------RSPN--------------GESSSP--------------DSG 271

  Fly   194 YKGRVSRVSQDSPFGSASLNLTNIRESDQGWYECKVVFL--------NRD---PKQHKNGTWFHL 247
            |   :|..:|.|...|||.:.:.:  .|||..|.:|...        |:|   |...|:....|.
Human   272 Y---LSPKNQPSALLSASASQSPM--EDQGEMEREVKSPGARHCYQDNQDLAVPHNRKSHPQPHS 331

  Fly   248 DVHAP--PRF--SVTPEDIIYVNLGDSIILNCQADGTPTPEILWYKDANPVDPSPTVGIFNDGTE 308
            .:|.|  |||  .:..:::..   |..:.|.|:..|.|||.:.|:.:...:..:|.:.|..:|.:
Human   332 ALHFPAAPRFIQKLRSQEVAE---GSRVYLECRVTGNPTPRVRWFCEGKELHNTPDIQIHCEGGD 393

  Fly   309 LR---ISTIRHEDIGEYTCIARNGEGQVSHTARVIIAGGAVIMVPPTNQTKLEGEKVIFSCEAKA 370
            |.   |:....:|.|.|||:|.|..|..:.:|.|.|.|        .:.|..:.|.:.|...|.|
Human   394 LHTLIIAEAFEDDTGRYTCLATNPSGSDTTSAEVFIEG--------ASSTDSDSESLAFKSRAGA 450

  Fly   371 MPG--------NVTVRWYREGSPVREVAALETRVTIRKDGSLIINPI-----KPDDSGQYLCEVT 422
            ||.        ::|:     ||     ::.:|.||     :.:|.|:     :......|||...
Human   451 MPQAQKKTTSVSLTI-----GS-----SSPKTGVT-----TAVIQPLSVPVQQVHSPTSYLCRPD 500

  Fly   423 NGIGDPQSASAYLSVEYPAKVTFTPTVQYLPFRLAGVV--QCYIKSSPQLQYVTWTKDKRLLEPY 485
            .      :.:||    :|.  .||..:|........||  :|.::.:|.|| |.|.:        
Human   501 G------TTTAY----FPP--VFTKELQNTAVAEGQVVVLECRVRGAPPLQ-VQWFR-------- 544

  Fly   486 QMKDIVVMANGSLLFTRVNEEHQGQYACTPYNAQGTAGASGVMDV----LVRKPPAFTVEPETLY 546
                                             ||    |.:.|.    :::|.|..|.|||.: 
Human   545 ---------------------------------QG----SEIQDSPDFRILQKKPRSTAEPEEI- 571

  Fly   547 QRKVGDSVEMHCDALEAEGTERPTIKWQRQEGEQLTESQRNRIKISGGNITIENLRREDFGYYQC 611
                       |..:.||...                                    ||.|.:.|
Human   572 -----------CTLVIAETFP------------------------------------EDAGIFTC 589

  Fly   612 VVSNEVATLMAVTQLVI-EGTQPHAPYNITGKATE---------------SSITLQWLPGYSGGS 660
            ...|:..:..:..|||: .....:..|...|::..               ||:.|    .....|
Human   590 SARNDYGSATSTAQLVVTSANTENCSYESMGESNNDHFQHFPPPPPILETSSLEL----ASKKPS 650

  Fly   661 EYKQDYTIWFREAGVN-----------DWQTISVTPSGSTQVTING-------------LASGTT 701
            |.:|   :...|.|::           :.:|..|.||......|||             |.|.|.
Human   651 EIQQ---VNNPELGLSRAALQMQFNAAERETNGVHPSRGVNGLINGKANSNKSLPTPAVLLSPTK 712

  Fly   702 YEFQVVGRNVLGDGMMSKVMT-VRTLEDA-----PAAPRNVKAAT--QPPDSFFQL-------MP 751
            ....::.:..|....:.::.. :|..::|     |.|||:...:.  .||.:|.:|       .|
Human   713 EPPPLLAKPKLDPLKLQQLQNQIRLEQEAGARQPPPAPRSAPPSPPFPPPPAFPELAACTPPASP 777

  Fly   752 DEADLLAYFDIYFHTDSR--------GTLVYSPPKLRVKGPKPGPP--RNVSVTEVSNGFLITWQ 806
            :....||         ||        |:..|:.||..:.....||.  .....:..|:..|.:..
Human   778 EPMSALA---------SRSAPAMQSSGSFNYARPKQFIAAQNLGPASGHGTPASSPSSSSLPSPM 833

  Fly   807 SP----LERAHIVKF-YTIKYRTDAQWKTLNRGQIRPEETQYLVKNLVGGRTYYFRV-------- 858
            ||    ..||.:..| .......:|.|.:.:.....|...       |...|..|.|        
Human   834 SPTPRQFGRAPVPPFAQPFGAEPEAPWGSSSPSPPPPPPP-------VFSPTAAFPVPDVFPLPP 891

  Fly   859 -----LANSEKSYESSDEVKF-----------------PVPARVKHKAITAGV------------ 889
                 .:..:.|:.||...:|                 |.||.|....:..||            
Human   892 PPPPLPSPGQASHCSSPATRFGHSQTPAAFLSALLPSQPPPAAVNALGLPKGVTPAGFPKKASRT 956

  Fly   890 --------VGGILFFIVAIILSVCAVKICNKRKRRKQEKEFNMVACRIT------------DAR- 933
                    :.|....::..:          :||.|.:|...|....|:|            |:. 
Human   957 ARIASDEEIQGTKDAVIQDL----------ERKLRFKEDLLNNGQPRLTYEERMARRLLGADSAT 1011

  Fly   934 --NIAANNHHLHNRSTGS--ISSGQVPLKKYKQTRISSLTAILIAILHWIWPPDRCTNCHSIYSS 994
              ||........|:..||  .|.|. ||...|:.::||....||:.:.           :.:..|
Human  1012 VFNIQEPEEETANQDIGSPHASVGS-PLDGQKEYKVSSCEQRLISEIE-----------YRLERS 1064

  Fly   995 PNLEDGDEDDGG---------------------------------GGRRRSVSRIQRSLDGRFV- 1025
            |..|.|||...|                                 .|..:  .:|....||:.: 
Human  1065 PVDESGDEVQYGDVPVENGMAPFFEMKLKHYKIFEGMPVTFTCRVAGNPK--PKIYWFKDGKQIS 1127

  Fly  1026 ---------LDVEGVSKLGYSQQTLESGNVDVVDGGLFERRNSNVSQKSSSDDGGFLSRRNFITA 1081
                     .|::|...|..:..||:                         |||.:       |.
Human  1128 PKSDHYTIQRDLDGTCSLHTTASTLD-------------------------DDGNY-------TI 1160

  Fly  1082 RASWRRPLVASSSQLSLQSAADSARGFLQGLLKIGAKQSAVPPNSQSYFDEAVSGARYQNVLRPY 1146
            .|:..:..::.:.:|.:|:.....|.                |.|.|         .:.:|.||.
Human  1161 MAANPQGRISCTGRLMVQAVNQRGRS----------------PRSPS---------GHPHVRRPR 1200

  Fly  1147 TSSNNLYGNADRSRPL-------HINTISGSLSQQQ-----------QLYTPSRISRIFSSSPQQ 1193
            :.|.:   :.|.:.|:       |.....|.|:.|:           .|.||. :|......|.:
Human  1201 SRSRD---SGDENEPIQERFFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPD-LSWQLDGKPVR 1261

  Fly  1194 LQPHHQQLLLSSG------------GSGAYPTHFSDLSTVYPPNSAERSSHNL 1234
            ....|:.|:..:|            .:|.|        |....|.|.::|.:|
Human  1262 PDSAHKMLVRENGVHSLIIEPVTSRDAGIY--------TCIATNRAGQNSFSL 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutlNP_001303307.1 V-set 137..250 CDD:284989 22/123 (18%)
IG_like 137..229 CDD:214653 16/91 (18%)
I-set 253..341 CDD:254352 26/92 (28%)
IGc2 268..331 CDD:197706 20/65 (31%)
I-set 346..437 CDD:254352 20/103 (19%)
Ig 349..437 CDD:299845 20/100 (20%)
Ig 459..530 CDD:299845 11/72 (15%)
IG_like 549..628 CDD:214653 10/78 (13%)
IGc2 551..617 CDD:197706 8/65 (12%)
FN3 633..725 CDD:238020 21/131 (16%)
FN3 786..874 CDD:238020 19/107 (18%)
PALLDXP_011530070.1 I-set 339..429 CDD:254352 26/92 (28%)
Ig 356..426 CDD:143165 20/69 (29%)
I-set 509..606 CDD:254352 31/192 (16%)
Ig 526..603 CDD:143165 25/170 (15%)
I-set 1086..1177 CDD:254352 15/124 (12%)
Ig 1103..1172 CDD:143165 14/102 (14%)
I-set 1220..1310 CDD:254352 19/96 (20%)
Ig 1238..1307 CDD:143165 15/78 (19%)
I-set 1319..1410 CDD:254352
Ig_Palladin_C 1336..1410 CDD:143301
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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