DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tutl and rig-5

DIOPT Version :9

Sequence 1:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster
Sequence 2:NP_001251131.1 Gene:rig-5 / 172791 WormBaseID:WBGene00004372 Length:482 Species:Caenorhabditis elegans


Alignment Length:375 Identity:98/375 - (26%)
Similarity:149/375 - (39%) Gaps:86/375 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 PIRRGQG------STPTPTIQVLQFVLVSLLALLAKNAQAHNIP--------EDAVHITAILGEG 145
            |..||:|      ..|......| |.|:..:.|:.|.|.:...|        ..||   |:||:.
 Worm    41 PTFRGRGRFVILFHIPLQEKMYL-FALLCGVLLVFKQACSRGAPPTIQQPSMSSAV---ALLGQD 101

  Fly   146 VIFNCHVEFPNDHPV--------PYVLQWDKKVSETGSDLPIYIWYESYPEHIEEGYKGRVSRVS 202
            |.|.|.|.....|.|        |.:|.:|:||....:.      ||..|         |:..:.
 Worm   102 VDFTCIVNDLGSHMVAFVKADSPPRLLSFDEKVFRRRNK------YELKP---------RIGDLH 151

  Fly   203 QDSPFGSASLNLTNIRESDQGWYECKVVFLNRDPKQHKNGTWFHLDVHAPPRFSVTPEDIIYVNL 267
            .:     ..|.:.|::|||:|.|.|::   |.:|.....|   .|||..||..|.:....:.|..
 Worm   152 NE-----WVLTIKNVQESDRGNYSCQI---NTEPITLSTG---ELDVKVPPVVSRSTPAAVEVRE 205

  Fly   268 GDSIILNCQADGTPTPEILWYK-DANPVDPSPTVG----IFNDGTELRISTIRHEDIGEYTCIAR 327
            |:::.|.|:|||.|||.::|.: |...:..:...|    :|: |..|.::.:..:.:.||.|:|.
 Worm   206 GNNVSLTCKADGNPTPTVIWRRQDRQIIRYNGATGFGASVFH-GPVLHLTKVSRKHMSEYLCVAS 269

  Fly   328 NG-EGQVSHTARVIIAGGAVIMVPPTNQTKLE------GEKVIFSCEAKAMPGNVTVRWYREGSP 385
            || ....|.|.::::.      .||..|.:.|      |......|..:|.| ...:.|.::|.|
 Worm   270 NGIPPDESWTVKLLVT------FPPLVQAQSETVQASVGSMARMVCTTEAWP-RPEMGWEKDGEP 327

  Fly   386 VRE---VAALET------RVTIRKDGSLIINPIKPDDSGQYLCEVTNGIG 426
            |.|   ||...|      .|.|     |.|..::....|.|.|...|..|
 Worm   328 VYESNNVAMTHTVSGQYHSVHI-----LEIRNVQSSHFGVYRCVAKNDNG 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutlNP_001303307.1 V-set 137..250 CDD:284989 31/120 (26%)
IG_like 137..229 CDD:214653 26/99 (26%)
I-set 253..341 CDD:254352 26/93 (28%)
IGc2 268..331 CDD:197706 21/68 (31%)
I-set 346..437 CDD:254352 25/96 (26%)
Ig 349..437 CDD:299845 25/93 (27%)
Ig 459..530 CDD:299845
IG_like 549..628 CDD:214653
IGc2 551..617 CDD:197706
FN3 633..725 CDD:238020
FN3 786..874 CDD:238020
rig-5NP_001251131.1 IG_like 92..189 CDD:214653 34/125 (27%)
Ig_3 191..270 CDD:372822 22/79 (28%)
IG 294..380 CDD:214652 22/85 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.