DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tutl and Dscam

DIOPT Version :9

Sequence 1:NP_001303307.1 Gene:tutl / 46015 FlyBaseID:FBgn0010473 Length:1536 Species:Drosophila melanogaster
Sequence 2:XP_006522949.1 Gene:Dscam / 13508 MGIID:1196281 Length:2034 Species:Mus musculus


Alignment Length:1604 Identity:347/1604 - (21%)
Similarity:553/1604 - (34%) Gaps:424/1604 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 HITAILGEGVIFNCHV-EFPNDHPVPYVLQWDKKVSETGSDLPIYIWYESYPEHIEEGYKGRVSR 200
            :||||.|.....:|.| .:|.     |.::|.|..:.    ||.        .|.:..::     
Mouse   512 NITAIAGRDTYIHCRVIGYPY-----YSIKWYKNANL----LPF--------NHRQVAFE----- 554

  Fly   201 VSQDSPFGSASLNLTNI-RESDQGWYECKVVFLNRDPKQHKNGTWFHLDVHAPPRFSVTPEDIIY 264
                   .:.:|.|::: :|.|:|.|.|.|:.    ..|.......|:.|..||  .:.|.:...
Mouse   555 -------NNGTLKLSDVQKEVDEGEYTCNVLV----QPQLSTSQSVHVTVKVPP--FIQPFEFPR 606

  Fly   265 VNLGDSIILNCQADGTPTP-EILWYKDANPVDPSPTVGIFN-DGT-ELRISTIRHEDIGEYTCIA 326
            .::|..:.:.|.......| .|.|.||..|:..|..|.|.| |.| .||||.:.....|.|||||
Mouse   607 FSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLSLMHNGNYTCIA 671

  Fly   327 RNGEGQVSHTARVIIAGGAVIMVPPTNQTKLEGEKVIFSCEAKAMPGNVTVRWYREGS--PVREV 389
            ||....|.|.:::|:......:|.|.:|..:.|:.||.:|.|:..|....|..:.:|:  |..:.
Mouse   672 RNEAAAVEHQSQLIVRVPPKFVVQPRDQDGIYGKAVILNCSAEGYPVPTIVWKFSKGAGVPQFQP 736

  Fly   390 AALETRVTIRKDGSLIINPIKPDDSGQYLCEVTNGIGDPQSASAYLSVEYPAKVTFTPTVQYLPF 454
            .||..|:.:..:|||:|..:..:|||.|||:|:|.:|...|.|.||:|:.||.:|..|.......
Mouse   737 IALNGRIQVLSNGSLLIKHVVEEDSGYYLCKVSNDVGADVSKSMYLTVKIPAMITSYPNTTLATQ 801

  Fly   455 RLAGVVQCYIKSSPQLQYVTWTKDKRLLEPYQMKDIV--------VMANGSLLFTRVNEEHQGQY 511
            .....:.|.......: .|.|.|:.|::.|...:.:|        |::...:|.| |.|: .|.:
Mouse   802 GQRKEMSCTAHGEKPI-IVRWEKEDRIINPEMARYLVSTKEVGEEVISTLQILPT-VRED-SGFF 863

  Fly   512 ACTPYNAQGTAGASGVMDVLVRKPPAFTVEPETLYQRKVGDSVEMHCDALEAEGTERPTIKWQ-- 574
            :|...|:.|.  ..|::.:.|::||               |..|:....::|...   |::|.  
Mouse   864 SCHAINSYGE--DRGIIQLTVQEPP---------------DPPEIEIKDVKARTI---TLRWTMG 908

  Fly   575 --------------RQEGEQLTESQRNR-IKISGGNITIENLRREDFGYYQCVVSNEVATLMAVT 624
                          :.:.:....:||.: :.....:.||.::........:....|.:.......
Mouse   909 FDGNSPITGYDIECKNKSDSWDSAQRTKDVSPQLNSATIIDIHPSSTYSIRMYAKNRIGKSEPSN 973

  Fly   625 QLVI---EGTQPHAPYNITGKATES-SITLQWLPGYSGGSEYKQD-----YTIWFRE---AGVND 677
            ::.|   |......|..:..:.|.| ||.:.|    ....::.|:     |.|.:||   .|...
Mouse   974 EITITADEAAPDGPPQEVHLEPTSSQSIRVTW----KAPKKHLQNGIIRGYQIGYREYSTGGNFQ 1034

  Fly   678 WQTISVTPSGSTQV-TINGLASGTTYEFQVVGRNVLGDGMMSKVMTVRTLEDAPA-APRNVKAAT 740
            :..||:..:|.::| |::.|...|.|...|...|..|.|..|:.:...||||.|: .|.||:|..
Mouse  1035 FNIISIDTTGDSEVYTLDNLNKFTQYGLVVQACNRAGTGPSSQEIITTTLEDVPSYPPENVQAIA 1099

  Fly   741 QPPDSF---FQLMPDEA---DLLAYFDIYFHTDSRGTL------VYSPPKL-------------- 779
            ..|:|.   :..:..||   .|..:..||:.....|.|      ..:.|.|              
Mouse  1100 TSPESISISWSTLSKEALNGILQGFRVIYWANLIDGELGEIKNVTTTQPSLELDGLEKYTNYSIQ 1164

  Fly   780 ------------------RVKGPKPGPPRNVSVTEVSNGFL-ITWQSPLERAHIVKFYTI----K 821
                              |.|...||||..|.....|...: ::|..||:...|::.||:    .
Mouse  1165 VLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAASASMVFVSWLPPLKLNGIIRKYTVFCSHP 1229

  Fly   822 YRTDAQWKTLNRGQIRPEETQYLVKNLVGGRTYYFRVLANSEKSYESSDEVKFPVP-ARVKHKAI 885
            |.|     .::..:..|:...|.:.||...|.|...|:|.:.....:|.|:....| |:...:.:
Mouse  1230 YPT-----VISEFEASPDSFSYRIPNLSRNRQYSVWVVAVTSAGRGNSSEIITVEPLAKAPARIL 1289

  Fly   886 T-AGVVGGILFFIVAIILSVCAVKICNKRKRRKQEKEFNMVACRIT-DARNIAANNHHLHNRSTG 948
            | :|.|  ...::..|:|...||.  :.....|..|:.|.....:| |.|....:|.....|:..
Mouse  1290 TFSGTV--TTPWMKDIVLPCKAVG--DPSPAVKWMKDSNGTPSLVTIDGRRSIFSNGSFIIRTVK 1350

  Fly   949 SISSGQ---VPLKKYKQTRISSLTAILIAILHWIWPPD--RCTNCHSIYSSPNLEDGDEDDGGGG 1008
            :..||.   |....:....|       |..|....|||  |.|...:..||..|.....|:||..
Mouse  1351 AEDSGYYSCVANNNWGSDEI-------ILNLQVQVPPDQPRLTVSKTTSSSITLSWLPGDNGGSS 1408

  Fly  1009 RRRSVSRIQRSLD-----GRFVLDVEGVSKLGYSQQTLESGN----VDVVDGGLFERRNSNVSQK 1064
            .|..:  :|.|.|     |.|.:   ..|:..|..:.|:.|.    ......|:...|.|.:   
Mouse  1409 IRGYI--LQYSEDNSEQWGSFPI---SPSERSYRLENLKCGTWYKFTLTAQNGVGPGRISEI--- 1465

  Fly  1065 SSSDDGGFLSRRNFITARASWRRPLVASSSQLSLQSAADSARGFLQGLLKIGAKQSAVPPNSQSY 1129
                          |.|:...:.|..:...:|.........|     |..||......|..|   
Mouse  1466 --------------IEAKTLGKEPQFSKEQELFASINTTRVR-----LNLIGWNDGGCPITS--- 1508

  Fly  1130 FDEAVSGARYQNVLRPYTSSNNLYGNADRSRPLHINTISGSLSQQQQLYTPSRISRIFSSSPQQL 1194
                     :....||:  ...::..|.|:          |||:...||              .|
Mouse  1509 ---------FTLEYRPF--GTTVWTTAQRT----------SLSKSYILY--------------DL 1538

  Fly  1195 QP----HHQQLLLSSGGSGAYPTHFSDL----STVYPP--NSAERSSHNLSSRYRYYSQELPSLR 1249
            |.    ..|..:.:|.|......:|:.|    ||: ||  .|..:|...|::     ::.|..|.
Mouse  1539 QEATWYELQMRVCNSAGCAEKQANFATLNYDGSTI-PPLIKSVVQSEEGLTT-----NEGLKILV 1597

  Fly  1250 TIQ--------------EETRRQQQQKQHPLEDHFVPLQLPSPPSWRSYYQSQASYRPRTRWYPR 1300
            ||.              ...||:::|:...|.|.            :|..:...|...||     
Mouse  1598 TISCILVGVLLLFVLLLVVRRRRREQRLKRLRDA------------KSLAEMLMSKNTRT----- 1645

  Fly  1301 HHSRLFSNRQQQHEMLSPLP--QLNLNLRNSM--------------------------------- 1330
              |...|.:||...|...:|  ||.:..|::|                                 
Mouse  1646 --SDTLSKQQQTLRMHIDIPRAQLLIEERDTMETIDDRSTVLLTDADFGEAAKQKSLTVTHTVHY 1708

  Fly  1331 ----------------NPG-------GLEASPESRSSSSGFGSKNTSNHPGS-------TSEWRL 1365
                            .||       ..:|.|.:|:.   :.|:.|.|.|..       |::|| 
Mouse  1709 QSVSQATGPLVDVSDARPGTNPTTRRNAKAGPTARNR---YASQWTLNRPHPTISAHTLTTDWR- 1769

  Fly  1366 LPPYRAPPSPPKHSGYFGGQQAQG---------QTPHGSYSYPRATT-------------PPYTM 1408
            ||..||..|..|.|..:....:|.         .|...|.:|.....             ..:|:
Mouse  1770 LPTPRATGSVDKESDSYSVSPSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTI 1834

  Fly  1409 AHWL-------EMISRLNAATDSNLPKAPCPVDVGSVDGHYEFDPATPTPSASSMLREDLNLHID 1466
            ....       ::.:..|..|||.....|      |..|...|..:.|.|.....:   :|:.:.
Mouse  1835 TECFISDTSSEQLTAGTNEYTDSLTSSTP------SESGICRFTASPPKPQDGGRV---VNMAVP 1890

  Fly  1467 THPYHHHTLGPLSGSLLH--SHAPYGGGARKQRSLP--AHLPRY 1506
              ..|...|...|....|  :|.|.       |:|.  .|||.|
Mouse  1891 --KAHRPVLETRSSKSRHQLTHVPL-------RALGDLIHLPPY 1925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tutlNP_001303307.1 V-set 137..250 CDD:284989 24/114 (21%)
IG_like 137..229 CDD:214653 21/93 (23%)
I-set 253..341 CDD:254352 30/90 (33%)
IGc2 268..331 CDD:197706 26/65 (40%)
I-set 346..437 CDD:254352 32/92 (35%)
Ig 349..437 CDD:299845 32/89 (36%)
Ig 459..530 CDD:299845 17/78 (22%)
IG_like 549..628 CDD:214653 10/95 (11%)
IGc2 551..617 CDD:197706 10/82 (12%)
FN3 633..725 CDD:238020 25/101 (25%)
FN3 786..874 CDD:238020 24/92 (26%)
DscamXP_006522949.1 Ig 15..115 CDD:386229
IGc2 239..300 CDD:197706
IG 320..400 CDD:214652
Ig_3 410..488 CDD:372822
IGc2 518..575 CDD:197706 16/85 (19%)
Ig 596..686 CDD:386229 31/91 (34%)
Ig_DSCAM 707..784 CDD:143211 28/76 (37%)
Ig 802..889 CDD:386229 21/106 (20%)
FN3 885..978 CDD:238020 12/110 (11%)
FN3 986..1083 CDD:238020 25/100 (25%)
FN3 1091..1184 CDD:238020 15/92 (16%)
FN3 1189..1278 CDD:238020 24/93 (26%)
Ig_3 1301..1363 CDD:372822 15/63 (24%)
FN3 1380..1470 CDD:238020 25/111 (23%)
FN3 1486..1555 CDD:238020 19/111 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10075
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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