DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and VLN2

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001323674.1 Gene:VLN2 / 818773 AraportID:AT2G41740 Length:976 Species:Arabidopsis thaliana


Alignment Length:760 Identity:242/760 - (31%)
Similarity:376/760 - (49%) Gaps:87/760 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RVMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWL 121
            :|:.|:|..||:.||.|||||||||.|..||:.:||||.||::|||.|.:||....| :|:|||:
plant     4 KVLDPAFQGAGQKPGTEIWRIENFEAVPVPKSEHGKFYMGDTYIVLQTTQNKGGAYL-FDIHFWI 67

  Fly   122 GLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVET 186
            |.:||.||||.||:.||:||.:|.|..|||||:|.|||..||||||..|...:|||.:|||.||.
plant    68 GKDTSQDEAGTAAVKTVELDAVLGGRAVQHREIQGHESDKFLSYFKPCIIPLEGGVASGFKTVEE 132

  Fly   187 NAQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQ 251
            .. .||||:..||||.:|::||..:.||:|..|.||||....||.:.|:.:...|:.||:.....
plant   133 EV-FETRLYTCKGKRAIRLKQVPFARSSLNHDDVFILDTEEKIYQFNGANSNIQERAKALEVVQY 196

  Fly   252 IRDQDHNGRARVQIVDD--FSTDADKQHFFDVLGS--------GSADQVPDESTADEDSAFERTD 306
            ::|:.|.|...|.||||  ..|::|...|:.:.|.        .:.|.:..|||..:        
plant   197 LKDKYHEGTCDVAIVDDGKLDTESDSGAFWVLFGGFAPIGRKVANDDDIVPESTPPK-------- 253

  Fly   307 AAAVSLYKVSDASGKLKVDIIGQKPLTQAMLDTRECFILDTGSGIFVWVGKGATQKEKTDAMAKA 371
                 ||.::|  ||:: .|.|.  |:::||:..:|::||.|:.|::|||:.....|:..|...|
plant   254 -----LYCITD--GKME-PIDGD--LSKSMLENTKCYLLDCGAEIYIWVGRVTQVDERKAASQSA 308

  Fly   372 QEFLRTKKYPAWTQIHRIVEGSESAPFKQYFDTW--------RDAGMSHSRLIRSALGIGSDELL 428
            :|||.::..|..|.:.|:::|.||..||..||:|        .:.|......:....|:|...:.
plant   309 EEFLASENRPKATHVTRVIQGYESHSFKSNFDSWPSGSATPGNEEGRGKVAALLKQQGVGLKGIA 373

  Fly   429 NDDEIDSVVTQLKKSGGRAFGFMPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPLLGFASY 493
            ....::..:..|.:|||:            :|  ..||     :..|.:.:|.::...|.....|
plant   374 KSAPVNEDIPPLLESGGK------------LE--VWYV-----NGKVKTPLPKEDIGKLYSGDCY 419

  Fly   494 VLTYNYEANNGDTGSLTYVWHGVKASAAARKRAFE--EGLVGSKDGLLVQTN--QGHEPRHFYKI 554
            ::.|.|.:...........|.|.|:....:..|..  ..:..|..|..||..  :|.||..|..:
plant   420 LVLYTYHSGERKDEYFLSCWFGKKSIPEDQDTAIRLANTMSNSLKGRPVQGRIYEGKEPPQFVAL 484

  Fly   555 F------KGKLLTSF------------TALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAF 601
            |      ||.|.:.:            |..|.:..|.::.||...:..|.:|...::||.|.:.|
plant   485 FQPMVVLKGGLSSGYKSSMGESESTDETYTPESIALVQVSGTGVHNNKAVQVETVATSLNSYECF 549

  Fly   602 VLHSGKSHKIYIWNGLGASAFEKQAAVDRFSDYW-DDVELEQVEEGAEPDEFWEELNGEGQYDRS 665
            :|.||.|  :::|:| ..|..|:.....:.:::. ..:.|:..:||.|...||..|.|:..: .|
plant   550 LLQSGTS--MFLWHG-NQSTHEQLELATKVAEFLKPGITLKHAKEGTESSTFWFALGGKQNF-TS 610

  Fly   666 LGDDGAPLLESRLFHCHLSSGGFLKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENG 730
            .......:.:..||....:.|.| :|||:..:.|:||.::||..||...|:::|||..|..:|..
plant   611 KKASSETIRDPHLFSFAFNRGKF-QVEEIYNFAQDDLLTEDIYFLDTHAEVFVWVGQCVEPKEKQ 674

  Fly   731 KLLDTAKLYFNLEPTARSF-DTVSIIRVPQGKEPRVFKRMFPNWD 774
            .:.:..:.|.:|..:.... ..|.|.::.:|.||..|...| :||
plant   675 TVFEIGQKYIDLAGSLEGLHPKVPIYKINEGNEPCFFTTYF-SWD 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 65/112 (58%)
gelsolin_S2_like 191..283 CDD:200445 36/93 (39%)
gelsolin_S3_like 307..404 CDD:200448 33/96 (34%)
ADF_gelsolin 470..558 CDD:301701 20/97 (21%)
ADF_gelsolin 569..661 CDD:301701 25/92 (27%)
gelsolin_S6_like 675..774 CDD:200447 29/99 (29%)
VLN2NP_001323674.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 97 1.000 Domainoid score I2427
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 339 1.000 Inparanoid score I645
OMA 1 1.010 - - QHG55329
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm2577
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - LDO PTHR11977
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X232
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

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