DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gel and capga

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:NP_001275994.1 Gene:capga / 565410 ZFINID:ZDB-GENE-060531-6 Length:345 Species:Danio rerio


Alignment Length:353 Identity:144/353 - (40%)
Similarity:202/353 - (57%) Gaps:17/353 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 RVMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWL 121
            |.....|.:..|.|||.:||:|..:.|:...:..|.||.||::|||:  ...||..   |:|.|:
Zfish     5 RAAQSQFTHEVREPGLWVWRVEKMKAVLLDPSQRGIFYNGDAYIVLS--NRGKDGS---DLHMWM 64

  Fly   122 GLETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVET 186
            |.::|.||.||.|:|..|||..|.|.|||||:||..||..|:..|..|:.|::|||.:|||...:
Zfish    65 GEKSSPDEQGACAMLATQLDSFLGGEPVQHRQVQGFESHEFMGLFPKGVSYKEGGVESGFKSARS 129

  Fly   187 NAQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQ 251
            .......|:|||||:|:|.|:|..|..|.|.|||||||.|.:|.|::||:|...|:.|....|..
Zfish   130 RIDPVKYLYQVKGKKNIRAREVEFSWGSFNKGDCFILDLGENIVVWIGSKANMFERQKVREIAML 194

  Fly   252 IRDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYKVS 316
            |||.:.||:|.:..|.:.....:.     |...|....:.|.|| :|||..:.|::|  ||||||
Zfish   195 IRDTERNGKAHIIDVREGEEPVEM-----VKALGPVPALKDSST-EEDSEADITNSA--SLYKVS 251

  Fly   317 DASGKLKVDIIGQK-PLTQAMLDTRECFILDTGSG--IFVWVGKGATQKEKTDAMAKAQEFLRTK 378
            :|:|::.:..:..| |..|.:|:..:|||||.||.  |:||.|.||..:||..|:..|.||:...
Zfish   252 NATGQMTLTKLCDKGPFGQELLEKDDCFILDNGSNGKIYVWKGNGANAEEKRVALKVADEFITEM 316

  Fly   379 KYPAW-TQIHRIVEGSESAPFKQYFDTW 405
            .||.. ||:..:.:|.||..|||:|.:|
Zfish   317 NYPRMRTQVEILPQGRESVLFKQFFKSW 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 48/112 (43%)
gelsolin_S2_like 191..283 CDD:200445 37/91 (41%)
gelsolin_S3_like 307..404 CDD:200448 43/100 (43%)
ADF_gelsolin 470..558 CDD:301701
ADF_gelsolin 569..661 CDD:301701
gelsolin_S6_like 675..774 CDD:200447
capgaNP_001275994.1 gelsolin_S1_like 16..119 CDD:200446 47/107 (44%)
gelsolin_S2_like 137..223 CDD:200445 37/90 (41%)
gelsolin_S3_like 245..343 CDD:200448 43/99 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574418
Domainoid 1 1.000 70 1.000 Domainoid score I9475
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.850

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