DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and vill

DIOPT Version :9

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:XP_021325987.1 Gene:vill / 555361 ZFINID:ZDB-GENE-081222-1 Length:910 Species:Danio rerio


Alignment Length:776 Identity:282/776 - (36%)
Similarity:400/776 - (51%) Gaps:77/776 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 HPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWLGLE 124
            |..|.|..|.|||:||.|...:.|..|:..:|.|:.||.:|:||...|...   |.|:|:|:|..
Zfish    65 HDLFKNIQRKPGLQIWTINKMQMVAVPEQAFGNFFEGDCYIILNVSNNPAQ---SIDIHYWIGNS 126

  Fly   125 TSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVETNAQ 189
            :|.||.|||||...|||:...|.|||:||||.|||..|.||||||:.|::|||.:||.|||||..
Zfish   127 SSQDEQGAAAIYVTQLDENFGGSPVQYREVQGHESVKFKSYFKNGLIYKKGGVASGFTHVETNVY 191

  Fly   190 GETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQIRD 254
            ...||..|||.::|..|:|.:|.:|.|.||.|:||.|..|..:.|.|:.|.|||||:..|..|||
Zfish   192 NIQRLLHVKGTKHVTGREVEVSWNSFNLGDVFLLDLGKAIIQWNGPQSNRQEKLKAVMLAQDIRD 256

  Fly   255 QDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPDESTADEDSAFERTDAAAVSLYKVSDAS 319
            ::..|||::.:::....:|..: ...|:.|....::.....|..|....:...:.|.||:|||||
Zfish   257 RERGGRAQIGVIEGAQEEASPE-LMKVMVSVLGQRIGQMKEAIPDDKPGQNQISNVKLYQVSDAS 320

  Fly   320 GKLKVDIIGQKPLTQAMLDTRECFILDT-GSGIFVWVGKGATQKEKTDAMAKAQEFLRTKKYPAW 383
            |:|.|..:...||||.:|.:.:|:|||. |:.|.||.||||:.:|:..||.:|..|::.|.|||.
Zfish   321 GQLLVQEVAVSPLTQDLLCSSDCYILDQGGTSIMVWKGKGASNEERRSAMGRAVGFIKAKNYPAS 385

  Fly   384 TQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIGSDELLND-DEIDSVVTQLKKSGGRA 447
            |::..:.||.|||.|||.|.:|.:.|.:.        |:|....:.. .::|.|          .
Zfish   386 TKVEVMSEGGESAMFKQLFKSWTEKGQTQ--------GLGKTHSVGKIAKVDQV----------K 432

  Fly   448 FGFMPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPL-----------LGFASYVLTYNYEA 501
            |..|..|.|..: ...:.:....|.::.|..:   |.|.|           .|...|::.|.|..
Zfish   433 FDVMELHAQPKL-AAQERMVDDASGQVQVWRI---ENLELKEVDRSTYGQFYGGDCYLVLYTYNR 493

  Fly   502 NNGDTGSLTYVWHGVKAS----AAARKRAFEEGLVGSKDGLLVQTN--QGHEPRHFYKIFKGKLL 560
            .| ....:.|:|.|..|:    .|:..:|.  .|....:|...|..  .|.|||||..||||:|:
Zfish   494 AN-KPQYILYIWQGRHATQDEVTASAYQAV--NLDNKYNGAPTQVRVVMGKEPRHFMAIFKGRLI 555

  Fly   561 -------TSFTALP-VTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGKSHKIYIWNGL 617
                   .|....| ..|:||::|||.|.:..|:||.|.:|||.::|.|:|.:.::  :::|.|.
Zfish   556 IFEGGTGRSGVVNPDPAARLFQVRGTHELNTKATEVPARASSLNTNDVFLLKTYQT--VFLWYGK 618

  Fly   618 GASAFEKQ---AAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQY--DRSLGDDGAPLLESR 677
            |.|..|::   |..|..|..    :.:.|.||.||..||..|.|:..|  |:.| ::...|.|.|
Zfish   619 GCSGDEREMGKAVADLLSGQ----DKQTVMEGQEPAAFWVPLGGKAPYASDKRL-EEEVSLHEPR 678

  Fly   678 LFHCHLSSGGFLKVEEVAQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENGKLLDTAKLYFNL 742
            ||.|...:|.|| :.|||.:.|:|||.||:||||..|||:||:|...::.|..:...:|..|...
Zfish   679 LFECSNQTGRFL-MTEVADFTQDDLDEDDVMLLDTWDEIFLWIGNSANQYEIQESSSSAVEYLKT 742

  Fly   743 EPTARSFDTVSIIRVPQGKEPRVFKRMFPNWDDNYWQNQPSYEDMK-------QLVIDANN 796
            .|..|...| .|..|.||.||..|...|..||.:.|....|||:||       |:.:..||
Zfish   743 HPAGRDAGT-PITTVKQGYEPPTFTGWFNAWDAHKWSGGLSYEEMKSKLGDVSQITVSLNN 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 54/112 (48%)
gelsolin_S2_like 191..283 CDD:200445 35/91 (38%)
gelsolin_S3_like 307..404 CDD:200448 47/97 (48%)
ADF_gelsolin 470..558 CDD:301701 28/104 (27%)
ADF_gelsolin 569..661 CDD:301701 34/94 (36%)
gelsolin_S6_like 675..774 CDD:200447 41/98 (42%)
villXP_021325987.1 gelsolin_S1_like 68..178 CDD:200446 54/112 (48%)
gelsolin_S2_like 194..282 CDD:200445 34/88 (39%)
gelsolin_S3_like 309..406 CDD:200448 47/96 (49%)
gelsolin_S4_like 450..550 CDD:200449 25/105 (24%)
gelsolin_S5_like 571..661 CDD:200444 34/95 (36%)
gelsolin_S6_like 676..773 CDD:200447 41/98 (42%)
VHP 876..910 CDD:308044
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574420
Domainoid 1 1.000 70 1.000 Domainoid score I9475
eggNOG 1 0.900 - - E1_KOG0443
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 443 1.000 Inparanoid score I1618
OMA 1 1.010 - - QHG55329
OrthoDB 1 1.010 - - D1376537at2759
OrthoFinder 1 1.000 - - FOG0000527
OrthoInspector 1 1.000 - - otm24470
orthoMCL 1 0.900 - - OOG6_100298
Panther 1 1.100 - - LDO PTHR11977
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X232
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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