DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Gel and gsn

DIOPT Version :10

Sequence 1:NP_524865.2 Gene:Gel / 46008 FlyBaseID:FBgn0010225 Length:798 Species:Drosophila melanogaster
Sequence 2:XP_031746326.1 Gene:gsn / 549610 XenbaseID:XB-GENE-489535 Length:750 Species:Xenopus tropicalis


Alignment Length:768 Identity:275/768 - (35%)
Similarity:411/768 - (53%) Gaps:88/768 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 VMHPSFANAGRTPGLEIWRIENFEPVIYPKTNYGKFYTGDSFIVLNTIENKKDKKLSWDVHFWLG 122
            |.||.|..||:.|||::||:|.|:.|..|:..||.|:|||:::||:||:.:.. .|.:|:|:|||
 Frog    20 VDHPEFEKAGKAPGLQVWRVEKFDLVAVPQNQYGSFFTGDAYLVLSTIKTRSG-NLQYDLHYWLG 83

  Fly   123 LETSTDEAGAAAILTVQLDDLLNGGPVQHREVQDHESQLFLSYFKNGIRYEQGGVGTGFKHVETN 187
            .|.:.||:|:|||.|||:||.|.|.|:|:||||.:||..||.|||.||:|:.|||.:||.||..|
 Frog    84 DECTQDESGSAAIFTVQMDDHLGGQPIQNREVQGYESSTFLGYFKPGIKYKAGGVASGFTHVVPN 148

  Fly   188 AQGETRLFQVKGKRNVRVRQVNLSVSSMNTGDCFILDAGSDIYVYVGSQAKRVEKLKAISAANQI 252
            .....||.||||:|.||..:|.::..|.|.|||||||.|::||.:.||::.:.|||:|.:.|..|
 Frog   149 EVDIKRLLQVKGRRVVRATEVPVNWDSFNQGDCFILDLGNEIYQWFGSKSNQFEKLRATAVAKGI 213

  Fly   253 RDQDHNGRARVQIVDDFSTDADKQHFFDVLGSGSADQVPD--ESTADEDSAFERTDAAAVSLYKV 315
            ||.:.|||:::.:|::   ..:::...:|||     |.||  |..||:..| :.::.....||||
 Frog   214 RDTERNGRSKLYVVEE---GMEREKMIEVLG-----QKPDLPEGPADDIKA-DASNRKLAKLYKV 269

  Fly   316 SDASGKLKVDIIG-QKPLTQAMLDTRECFILDTGSG--IFVWVGKGATQKEKTDAMAKAQEFLRT 377
            ||..|.:.|.::. |.|.|||.|::.:||:||.||.  ||||.|:.|..:||..|:..|.||:..
 Frog   270 SDGKGAMTVSLVADQNPFTQAALNSDDCFVLDHGSDGKIFVWKGRNANMEEKKAALKTATEFISK 334

  Fly   378 KKYPAWTQIHRIVEGSESAPFKQYFDTWRDAGMSHSRLIRSALGIG--SDELLNDDEIDSVVTQL 440
            ..||..||:..:.|..|:..|||:|..|:|      :.....:|:.  ...:...:.:...|:.|
 Frog   335 MGYPKQTQVQVLPENGETPLFKQFFKNWKD------KEATEGMGVAYVPHHIAKIENVPFDVSGL 393

  Fly   441 KKSGGRAFGFMPDHGQNVIETITQYVAKPGSDEIVVSTVPFDEKLPL--------LGFASYVLTY 497
            .:|...|    ..||          :...||.:..:..:...:|:|:        .|..||::.|
 Frog   394 HESPAMA----AQHG----------MVDDGSGQKQIWRIEDCKKVPVSKSLYGQFYGGDSYIILY 444

  Fly   498 NYEANNGDTGSLTYVWHG-------VKASAAARKRAFEE----GLVGSKDGLLVQTNQGHEPRHF 551
            ||: :.|..|.:.|.|.|       |.|||....:..||    .:.|::.  .|:..||.||.|.
 Frog   445 NYK-HGGKQGQIIYTWQGDESSKDEVTASAILSAQLDEELGGTPVQGARS--QVRVVQGKEPAHL 506

  Fly   552 YKIFKGKLL------TS---FTALPVTAQLFRIRGTVESDVHASEVAADSSSLASSDAFVLHSGK 607
            ..:|.||.:      ||   ........:||::|.:......|.||.:.:|:|.|:|||||.:..
 Frog   507 MSLFGGKPMIVNKGGTSREGGQTKDADVRLFQVRASSSGFSRAVEVDSTASNLNSNDAFVLKTPS 571

  Fly   608 SHKIYIWNGLGASAFEKQAAVDRFSDYWDDVELEQVEEGAEPDEFWEELNGEGQYDRSLGDDGAP 672
            :  .|.|.|.|::..||:.|.:..:..  .|...::.||.|.|:||..|.|:..|..|     |.
 Frog   572 A--AYQWVGQGSTDAEKKGAQELLAVL--GVSASEILEGQETDDFWAALGGKADYRTS-----AR 627

  Fly   673 LLES------RLFHCHLSSGGFLKVEEV-AQYEQEDLDSDDIMLLDAGDEIYLWVGYGVSEEENG 730
            |.:.      |||.|...:|.|: :||| .:..|:||.:||:||||..|::::|||....|:|..
 Frog   628 LKDKLNTHPPRLFACSNKTGRFI-IEEVPGEISQDDLATDDVMLLDTWDQVFVWVGKEAQEDEKK 691

  Fly   731 KLLDTAKLYFNLEPTARSFDT-VSIIRVPQGKEPRVFKRMFPNWDDNYWQNQP 782
            :.:.:|..|...:|..|...| |:||:  ||.||..|...|..|:.:||...|
 Frog   692 EAIASAYKYIESDPANRDKRTPVAIIK--QGFEPPTFTGWFLGWETDYWDISP 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GelNP_524865.2 gelsolin_S1_like 63..176 CDD:200446 58/112 (52%)
gelsolin_S2_like 191..283 CDD:200445 37/91 (41%)
gelsolin_S3_like 307..404 CDD:200448 42/99 (42%)
ADF_gelsolin 470..558 CDD:472830 29/106 (27%)
ADF_gelsolin 569..661 CDD:472830 30/91 (33%)
gelsolin_S6_like 675..774 CDD:200447 38/106 (36%)
gsnXP_031746326.1 gelsolin_S1_like 25..137 CDD:200446 58/112 (52%)
gelsolin_S2_like 153..241 CDD:200445 37/90 (41%)
gelsolin_S3_like 261..361 CDD:200448 42/99 (42%)
gelsolin_S4_like 405..510 CDD:200449 28/107 (26%)
gelsolin_S5_like 534..621 CDD:200444 30/90 (33%)
gelsolin_S6_like 636..734 CDD:200447 38/100 (38%)

Return to query results.
Submit another query.